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package uk.ac.ebi.ep.eptools.main;
import org.apache.log4j.Logger;
import org.springframework.context.annotation.AnnotationConfigApplicationContext;
import uk.ac.ebi.ep.analysis.config.AnalysisConfig;
import uk.ac.ebi.ep.analysis.service.DataAnalyzer;
import uk.ac.ebi.ep.data.dataconfig.DataConfig;
import uk.ac.ebi.ep.data.dataconfig.DevDataConfig;
import uk.ac.ebi.ep.data.dataconfig.GlobalConfig;
import uk.ac.ebi.ep.data.dataconfig.ProdDataConfig;
/**
*
* @author Joseph <joseph@ebi.ac.uk>
*/
public class Analysis {
private static final Logger logger = Logger.getLogger(Analysis.class);
private Analysis() {
}
public static void main(String[] args) throws Exception {
String profile = "";
if (args == null || args.length == 0) {
logger.error("Please provide required parameters");
System.exit(0);
}
if (args.length == 1) {
profile = args[0];
AnnotationConfigApplicationContext context = new AnnotationConfigApplicationContext();
context.getEnvironment().setActiveProfiles(profile);
context.register(AnalysisConfig.class);
context.register(DataConfig.class);
context.register(ProdDataConfig.class);
context.register(DevDataConfig.class);
context.register(GlobalConfig.class);
context.scan("uk.ac.ebi.ep.analysis.config");
context.refresh();
DataAnalyzer analyzer = context.getBean(DataAnalyzer.class);
analyzer.populateEnzymesWithEvidences();
}
}
}