/* Copyright (C) 2006 Univ. of Massachusetts Amherst, Computer Science Dept. This file is part of "MALLET" (MAchine Learning for LanguagE Toolkit). http://www.cs.umass.edu/~mccallum/mallet This software is provided under the terms of the Common Public License, version 1.0, as published by http://www.opensource.org. For further information, see the file `LICENSE' included with this distribution. */ package cc.mallet.grmm.test; import junit.framework.TestCase; import junit.framework.TestSuite; import gnu.trove.TDoubleArrayList; import java.io.IOException; import java.io.BufferedReader; import java.io.StringReader; import cc.mallet.grmm.types.*; import cc.mallet.grmm.util.ModelReader; import cc.mallet.types.MatrixOps; import cc.mallet.util.Randoms; /** * $Id: TestBetaFactor.java,v 1.1 2007/10/22 21:37:41 mccallum Exp $ */ public class TestBetaFactor extends TestCase { public TestBetaFactor (String name) { super (name); } public void testVarSet () { Variable var = new Variable (Variable.CONTINUOUS); Factor f = new BetaFactor (var, 0.5, 0.5); assertEquals (1, f.varSet ().size ()); assertTrue (f.varSet().contains (var)); } public void testValue () { Variable var = new Variable (Variable.CONTINUOUS); Factor f = new BetaFactor (var, 1.0, 1.2); Assignment assn = new Assignment (var, 0.7); assertEquals (0.94321, f.value(assn), 1e-5); } public void testSample () { Variable var = new Variable (Variable.CONTINUOUS); Randoms r = new Randoms (2343); Factor f = new BetaFactor (var, 0.7, 0.5); TDoubleArrayList lst = new TDoubleArrayList (); for (int i = 0; i < 100000; i++) { Assignment assn = f.sample (r); lst.add (assn.getDouble (var)); } double[] vals = lst.toNativeArray (); double mean = MatrixOps.mean (vals); assertEquals (0.7 / (0.5 + 0.7), mean, 0.01); } public void testSample2 () { Variable var = new Variable (Variable.CONTINUOUS); Randoms r = new Randoms (2343); Factor f = new BetaFactor (var, 0.7, 0.5, 3.0, 8.0); TDoubleArrayList lst = new TDoubleArrayList (); for (int i = 0; i < 100000; i++) { Assignment assn = f.sample (r); lst.add (assn.getDouble (var)); } double[] vals = lst.toNativeArray (); double mean = MatrixOps.mean (vals); assertEquals (5.92, mean, 0.01); } static String mdlstr = "VAR u1 u2 : continuous\n" + "u1 ~ Beta 0.2 0.7\n" + "u2 ~ Beta 1.0 0.3\n"; public void testSliceInFg () throws IOException { ModelReader reader = new ModelReader (); FactorGraph fg = reader.readModel (new BufferedReader (new StringReader (TestBetaFactor.mdlstr))); Variable u1 = fg.findVariable ("u1"); Variable u2 = fg.findVariable ("u2"); Assignment assn = new Assignment (new Variable[] { u1, u2 }, new double[] { 0.25, 0.85 }); FactorGraph fg2 = (FactorGraph) fg.slice (assn); assertEquals (2, fg2.factors ().size ()); assertEquals (0.59261 * 1.13202, fg2.value (new Assignment ()), 1e-5); } /** * @return a <code>TestSuite</code> */ public static TestSuite suite () { return new TestSuite (TestBetaFactor.class); } public static void main (String[] args) { TestSuite theSuite; if (args.length > 0) { theSuite = new TestSuite (); for (int i = 0; i < args.length; i++) { theSuite.addTest (new TestBetaFactor (args[i])); } } else { theSuite = (TestSuite) TestBetaFactor.suite (); } junit.textui.TestRunner.run (theSuite); } }