/* * #%L * Fork of JAI Image I/O Tools. * %% * Copyright (C) 2008 - 2014 Open Microscopy Environment: * - Board of Regents of the University of Wisconsin-Madison * - Glencoe Software, Inc. * - University of Dundee * %% * Redistribution and use in source and binary forms, with or without * modification, are permitted provided that the following conditions are met: * * 1. Redistributions of source code must retain the above copyright notice, * this list of conditions and the following disclaimer. * 2. Redistributions in binary form must reproduce the above copyright notice, * this list of conditions and the following disclaimer in the documentation * and/or other materials provided with the distribution. * * THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" * AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE * IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE * ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR CONTRIBUTORS BE * LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR * CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF * SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS * INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN * CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) * ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE * POSSIBILITY OF SUCH DAMAGE. * * The views and conclusions contained in the software and documentation are * those of the authors and should not be interpreted as representing official * policies, either expressed or implied, of any organization. * #L% */ /* * $RCSfile: AnWTFilter.java,v $ * $Revision: 1.1 $ * $Date: 2005/02/11 05:02:28 $ * $State: Exp $ * * Class: AnWTFilter * * Description: The abstract class for all analysis wavelet filters * * * * COPYRIGHT: * * This software module was originally developed by Raphaël Grosbois and * Diego Santa Cruz (Swiss Federal Institute of Technology-EPFL); Joel * Askelöf (Ericsson Radio Systems AB); and Bertrand Berthelot, David * Bouchard, Félix Henry, Gerard Mozelle and Patrice Onno (Canon Research * Centre France S.A) in the course of development of the JPEG2000 * standard as specified by ISO/IEC 15444 (JPEG 2000 Standard). This * software module is an implementation of a part of the JPEG 2000 * Standard. Swiss Federal Institute of Technology-EPFL, Ericsson Radio * Systems AB and Canon Research Centre France S.A (collectively JJ2000 * Partners) agree not to assert against ISO/IEC and users of the JPEG * 2000 Standard (Users) any of their rights under the copyright, not * including other intellectual property rights, for this software module * with respect to the usage by ISO/IEC and Users of this software module * or modifications thereof for use in hardware or software products * claiming conformance to the JPEG 2000 Standard. Those intending to use * this software module in hardware or software products are advised that * their use may infringe existing patents. The original developers of * this software module, JJ2000 Partners and ISO/IEC assume no liability * for use of this software module or modifications thereof. No license * or right to this software module is granted for non JPEG 2000 Standard * conforming products. JJ2000 Partners have full right to use this * software module for his/her own purpose, assign or donate this * software module to any third party and to inhibit third parties from * using this software module for non JPEG 2000 Standard conforming * products. This copyright notice must be included in all copies or * derivative works of this software module. * * Copyright (c) 1999/2000 JJ2000 Partners. * * * */ package jj2000.j2k.wavelet.analysis; import jj2000.j2k.codestream.writer.*; import jj2000.j2k.wavelet.*; import jj2000.j2k.image.*; import jj2000.j2k.util.*; import java.util.*; import java.io.*; /** * This abstract class defines the methods of all analysis wavelet * filters. Specialized abstract classes that work on particular data * types (int, float) provide more specific method calls while * retaining the generality of this one. See the AnWTFilterInt * and AnWTFilterFloat classes. Implementations of analysis * filters should inherit from one of those classes. * * <P>All analysis wavelet filters should follow the following conventions: * * <P>- The first sample to filter is the low-pass one. As a * consequence, if the input signal is of odd-length then the low-pass * output signal is one sample longer than the high-pass output * one. Therefore, if the length of input signal is N, the low-pass * output signal is of length N/2 if N is even and N/2+1/2 if N is * odd, while the high-pass output signal is of length N/2 if N is * even and N/2-1/2 if N is odd. * * <P>- The normalization is 1 for the DC gain and 2 for the Nyquist * gain (Type I normalization), for both reversible and non-reversible * filters. * * <P>If the length of input signal is N, the low-pass output signal * is of length N/2 if N is even and N/2+1/2 if N is odd, while the * high-pass output sample is of length N/2 if N is even and N/2-1/2 * if N is odd. * * <P>The analyze method may seem very complicated, but is designed to * minimize the amount of data copying and redundant calculations when * used for block-based or line-based wavelet transform * implementations, while being applicable to full-frame transforms as * well. * * <P>All filters should implement the equals() method of the Object * class. The call x.equals(y) should test if the 'x' and 'y' filters are the * same or not, in what concerns the bit stream header syntax (two filters are * the same if the same filter code should be output to the bit stream). * * @see AnWTFilterInt * * @see AnWTFilterFloat * */ public abstract class AnWTFilter implements WaveletFilter{ /** The prefix for wavelet filter options: 'F' */ public final static char OPT_PREFIX = 'F'; /** The list of parameters that is accepted for wavelet filters. Options * for wavelet filters start with a 'F'. */ private final static String [][] pinfo = { { "Ffilters", "[<tile-component idx>] <id> "+ "[ [<tile-component idx>] <id> ...]", "Specifies which filters to use for specified tile-component.\n"+ "<tile-component idx>: see general note\n"+ "<id>: ',' separates horizontal and vertical filters, ':' separates"+ " decomposition levels filters. JPEG 2000 part I only supports w5x3"+ " and w9x7 filters.",null}, }; /** * Filters the input signal by this analysis filter, decomposing * it in a low-pass and a high-pass signal. This method performs * the filtering and the subsampling with the low pass first * filtering convention. * * <P>The input signal resides in the inSig array. The index of * the first sample to filter (i.e. that will generate the first * low-pass output sample) is given by inOff. The number of * samples to filter is given by inLen. This array must be of the * same type as the one for which the particular implementation * works with (which is returned by the getDataType() method). * * <P>The input signal can be interleaved with other signals in * the same inSig array, and this is determined by the inStep * argument. This means that the first sample of the input signal * is inSig[inOff], the second is inSig[inOff+inStep], the third * is inSig[inOff+2*inStep], and so on. Therefore if inStep is 1 * there is no interleaving. This feature allows to filter columns * of a 2-D signal, when it is stored in a line by line order in * inSig, without having to copy the data, in this case the inStep * argument should be the line width. * * <P>This method also allows to apply the analysis wavelet filter * by parts in the input signal using an overlap and thus * producing the same coefficients at the output. The tailOvrlp * argument specifies how many samples in the input signal, before * the first one to be filtered, can be used for overlap. Then, * the filter instead of extending the input signal will use those * samples to calculate the first output samples. The argument * tailOvrlp can be 0 for no overlap, or some value that provides * partial or full overlap. There should be enough samples in the * input signal, before the first sample to be filtered, to * support the overlap. The headOvrlp provides the same * functionality but at the end of the input signal. The inStep * argument also applies to samples used for overlap. This overlap * feature can be used for line-based wavelet transforms (in which * case it will only be used when filtering the columns) or for * overlapping block-based wavelet transforms (in which case it * will be used when filtering lines and columns). * * <P>The low-pass output signal is placed in the lowSig * array. The lowOff and lowStep arguments are analogous to the * inOff and inStep ones, but they apply to the lowSig array. The * lowSig array must be long enough to hold the low-pass output * signal. * * <P>The high-pass output signal is placed in the highSig * array. The highOff and highStep arguments are analogous to the * inOff and inStep ones, but they apply to the highSig array. The * highSig array must be long enough to hold the high-pass output * signal. * * @param inSig This is the array that contains the input * signal. It must be of the correct type (e.g., it must be int[] * if getDataType() returns TYPE_INT). * * @param inOff This is the index in inSig of the first sample to * filter. * * @param inLen This is the number of samples in the input signal * to filter. * * @param inStep This is the step, or interleave factor, of the * input signal samples in the inSig array. See above. * * @param tailOvrlp This is the number of samples in the input * signal before the first sample to filter that can be used for * overlap. See above. * * @param headOvrlp This is the number of samples in the input * signal after the last sample to filter that can be used for * overlap. See above. * * @param lowSig This is the array where the low-pass output * signal is placed. It must be of the same type as inSig and it * should be long enough to contain the output signal. * * @param lowOff This is the index in lowSig of the element where * to put the first low-pass output sample. * * @param lowStep This is the step, or interleave factor, of the * low-pass output samples in the lowSig array. See above. * * @param highSig This is the array where the high-pass output * signal is placed. It must be of the same type as inSig and it * should be long enough to contain the output signal. * * @param highOff This is the index in highSig of the element where * to put the first high-pass output sample. * * @param highStep This is the step, or interleave factor, of the * high-pass output samples in the highSig array. See above. * * @see WaveletFilter#getDataType * * * * * */ public abstract void analyze_lpf(Object inSig, int inOff, int inLen, int inStep, Object lowSig, int lowOff, int lowStep, Object highSig, int highOff, int highStep); /** * Filters the input signal by this analysis filter, decomposing * it in a low-pass and a high-pass signal. This method performs * the filtering and the subsampling with the high pass first filtering * convention. * * <P>The input signal resides in the inSig array. The index of * the first sample to filter (i.e. that will generate the first * high-pass output sample) is given by inOff. The number of * samples to filter is given by inLen. This array must be of the * same type as the one for which the particular implementation * works with (which is returned by the getDataType() method). * * <P>The input signal can be interleaved with other signals in * the same inSig array, and this is determined by the inStep * argument. This means that the first sample of the input signal * is inSig[inOff], the second is inSig[inOff+inStep], the third * is inSig[inOff+2*inStep], and so on. Therefore if inStep is 1 * there is no interleaving. This feature allows to filter columns * of a 2-D signal, when it is stored in a line by line order in * inSig, without having to copy the data, in this case the inStep * argument should be the line width. * * <P>The low-pass output signal is placed in the lowSig * array. The lowOff and lowStep arguments are analogous to the * inOff and inStep ones, but they apply to the lowSig array. The * lowSig array must be long enough to hold the low-pass output * signal. * * <P>The high-pass output signal is placed in the highSig * array. The highOff and highStep arguments are analogous to the * inOff and inStep ones, but they apply to the highSig array. The * highSig array must be long enough to hold the high-pass output * signal. * * @param inSig This is the array that contains the input * signal. It must be of the correct type (e.g., it must be int[] * if getDataType() returns TYPE_INT). * * @param inOff This is the index in inSig of the first sample to * filter. * * @param inLen This is the number of samples in the input signal * to filter. * * @param inStep This is the step, or interleave factor, of the * input signal samples in the inSig array. See above. * * @param lowSig This is the array where the low-pass output * signal is placed. It must be of the same type as inSig and it * should be long enough to contain the output signal. * * @param lowOff This is the index in lowSig of the element where * to put the first low-pass output sample. * * @param lowStep This is the step, or interleave factor, of the * low-pass output samples in the lowSig array. See above. * * @param highSig This is the array where the high-pass output * signal is placed. It must be of the same type as inSig and it * should be long enough to contain the output signal. * * @param highOff This is the index in highSig of the element where * to put the first high-pass output sample. * * @param highStep This is the step, or interleave factor, of the * high-pass output samples in the highSig array. See above. * * @see WaveletFilter#getDataType * * * * * */ public abstract void analyze_hpf(Object inSig, int inOff, int inLen, int inStep, Object lowSig, int lowOff, int lowStep, Object highSig, int highOff, int highStep); /** * Returns the time-reversed low-pass synthesis waveform of the * filter, which is the low-pass filter. This is the time-reversed * impulse response of the low-pass synthesis filter. It is used * to calculate the L2-norm of the synthesis basis functions for a * particular subband (also called energy weight). * * <P>The returned array may not be modified (i.e. a reference to * the internal array may be returned by the implementation of * this method). * * @return The time-reversed low-pass synthesis waveform of the * filter. * * * */ public abstract float[] getLPSynthesisFilter(); /** * Returns the time-reversed high-pass synthesis waveform of the * filter, which is the high-pass filter. This is the * time-reversed impulse response of the high-pass synthesis * filter. It is used to calculate the L2-norm of the synthesis * basis functions for a particular subband (also called energy * weight). * * <P>The returned array may not be modified (i.e. a reference to * the internal array may be returned by the implementation of * this method). * * @return The time-reversed high-pass synthesis waveform of the * filter. * * * */ public abstract float[] getHPSynthesisFilter(); /** * Returns the equivalent low-pass synthesis waveform of a cascade * of filters, given the syhthesis waveform of the previous * stage. This is the result of upsampling 'in' by 2, and * concolving it with the low-pass synthesis waveform of the * filter. The length of the returned signal is 2*in_l+lp_l-2, * where in_l is the length of 'in' and 'lp_l' is the lengthg of * the low-pass synthesis filter. * * <P>The length of the low-pass synthesis filter is * getSynLowNegSupport()+getSynLowPosSupport(). * * @param in The synthesis waveform of the previous stage. * * @param out If non-null this array is used to store the * resulting signal. It must be long enough, or an * IndexOutOfBoundsException is thrown. * * @see #getSynLowNegSupport * * @see #getSynLowPosSupport * * * */ public float[] getLPSynWaveForm(float in[], float out[]) { return upsampleAndConvolve(in,getLPSynthesisFilter(),out); } /** * Returns the equivalent high-pass synthesis waveform of a * cascade of filters, given the syhthesis waveform of the * previous stage. This is the result of upsampling 'in' by 2, and * concolving it with the high-pass synthesis waveform of the * filter. The length of the returned signal is 2*in_l+hp_l-2, * where in_l is the length of 'in' and 'hp_l' is the lengthg of * the high-pass synthesis filter. * * <P>The length of the high-pass synthesis filter is * getSynHighNegSupport()+getSynHighPosSupport(). * * @param in The synthesis waveform of the previous stage. * * @param out If non-null this array is used to store the * resulting signal. It must be long enough, or an * IndexOutOfBoundsException is thrown. * * @see #getSynHighNegSupport * * @see #getSynHighPosSupport * * * */ public float[] getHPSynWaveForm(float in[], float out[]) { return upsampleAndConvolve(in,getHPSynthesisFilter(),out); } /** * Returns the signal resulting of upsampling (by 2) the input * signal 'in' and then convolving it with the time-reversed * signal 'wf'. The returned signal is of length l_in*2+l_wf-2, * where l_in is the length of 'in', and l_wf is the length of * 'wf'. * * <P>The 'wf' signal has to be already time-reversed, therefore * only a dot-product is performed (instead of a * convolution). This is equivalent to convolving with the * non-time-reversed 'wf' signal. * * @param in The signal to upsample and filter. If null it is * considered to be a dirac. * * @param wf The time-reversed impulse response used for * filtering. * * @param out If non-null this array is used to store the * resulting signal, it must be of length in.length*2+wf.length-2 * at least. An IndexOutOfBoundsException is thrown if this is not * the case. * * @return The resulting signal, of length in.length*2+wf.length-2 * * * */ private static float[] upsampleAndConvolve(float in[], float wf[], float out[]) { // NOTE: the effective length of the signal 'in' upsampled by // 2 is 2*in.length-1 (not 2*in.length), so the resulting signal // (after convolution) is of length 2*in.length-1+wf.length-1, // which is 2*in.length+wf.length-2 int i,k,j; float tmp; int maxi,maxk; // If in null, then simulate dirac if (in == null) { in = new float[1]; in[0] = 1.0f; } // Get output buffer if necessary if (out == null) { out = new float[in.length*2+wf.length-2]; } // Convolve the signals for (i=0, maxi=in.length*2+wf.length-2; i<maxi; i++) { tmp = 0.0f; // Calculate limits of loop below k = (i-wf.length+2)/2; if (k<0) k = 0; maxk = i/2+1; if (maxk > in.length) maxk = in.length; // Calculate dot-product with upsampling of 'in' by 2. for (j = 2*k-i+wf.length-1; k<maxk; k++, j+=2) { tmp += in[k]*wf[j]; } // Store result out[i] = tmp; } return out; } /** * Returns the type of filter used according to the FilterTypes * interface. * * @see FilterTypes * * @return The filter type. * */ public abstract int getFilterType(); /** * Returns the parameters that are used in this class and * implementing classes. It returns a 2D String array. Each of the * 1D arrays is for a different option, and they have 3 * elements. The first element is the option name, the second one * is the synopsis, the third one is a long description of what * the parameter is and the fourth is its default value. The * synopsis or description may be 'null', in which case it is * assumed that there is no synopsis or description of the option, * respectively. Null may be returned if no options are supported. * * @return the options name, their synopsis and their explanation, * or null if no options are supported. * * * */ public static String[][] getParameterInfo() { return pinfo; } }