/* This file is part of the OWL API.
* The contents of this file are subject to the LGPL License, Version 3.0.
* Copyright 2014, The University of Manchester
*
* This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 3 of the License, or (at your option) any later version.
* This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
* You should have received a copy of the GNU General Public License along with this program. If not, see http://www.gnu.org/licenses/.
*
* Alternatively, the contents of this file may be used under the terms of the Apache License, Version 2.0 in which case, the provisions of the Apache License Version 2.0 are applicable instead of those above.
* Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at
* http://www.apache.org/licenses/LICENSE-2.0
* Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. */
package org.semanticweb.owlapi.api.test.syntax;
import static org.junit.Assert.assertEquals;
import static org.junit.Assert.assertTrue;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.AnnotationAssertion;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.AnnotationProperty;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.Class;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.ClassAssertion;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.IRI;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.Literal;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.NamedIndividual;
import static org.semanticweb.owlapi.apibinding.OWLFunctionalSyntaxFactory.ObjectProperty;
import static org.semanticweb.owlapi.util.OWLAPIStreamUtils.asUnorderedSet;
import static org.semanticweb.owlapi.util.OWLAPIStreamUtils.contains;
import java.util.Set;
import org.junit.Test;
import org.semanticweb.owlapi.api.test.baseclasses.TestBase;
import org.semanticweb.owlapi.formats.RioTurtleDocumentFormat;
import org.semanticweb.owlapi.formats.TurtleDocumentFormat;
import org.semanticweb.owlapi.io.StringDocumentSource;
import org.semanticweb.owlapi.io.StringDocumentTarget;
import org.semanticweb.owlapi.model.AxiomType;
import org.semanticweb.owlapi.model.IRI;
import org.semanticweb.owlapi.model.OWLAnnotation;
import org.semanticweb.owlapi.model.OWLAnnotationProperty;
import org.semanticweb.owlapi.model.OWLAnonymousIndividual;
import org.semanticweb.owlapi.model.OWLAxiom;
import org.semanticweb.owlapi.model.OWLClass;
import org.semanticweb.owlapi.model.OWLDocumentFormat;
import org.semanticweb.owlapi.model.OWLIndividual;
import org.semanticweb.owlapi.model.OWLLiteral;
import org.semanticweb.owlapi.model.OWLObjectProperty;
import org.semanticweb.owlapi.model.OWLObjectPropertyDomainAxiom;
import org.semanticweb.owlapi.model.OWLOntology;
import org.semanticweb.owlapi.model.OWLOntologyCreationException;
import org.semanticweb.owlapi.model.OWLOntologyStorageException;
import org.semanticweb.owlapi.model.OWLSubClassOfAxiom;
import org.semanticweb.owlapi.vocab.OWL2Datatype;
@SuppressWarnings("javadoc")
public class TurtleTestCase extends TestBase {
@Test
public void testLoadingUTF8BOM() throws Exception {
IRI uri = IRI.create(getClass().getResource("/ttl-with-bom.ttl").toURI());
m.loadOntologyFromOntologyDocument(uri);
}
private final IRI iri = IRI.create("urn:test#", "literals");
private final TurtleDocumentFormat tf = new TurtleDocumentFormat();
private final IRI s = IRI.create("urn:test#", "s");
@Test
public void shouldParseFixedQuotesLiterals1() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(
new StringDocumentSource("<urn:test#s> <urn:test#p> ''' ''\\' ''' .", iri, tf, null));
o.annotationAssertionAxioms(s)
.forEach(ax -> assertEquals(" ''' ", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseFixedQuotesLiterals6() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(new StringDocumentSource(
"<urn:test#s> <urn:test#p> \"\"\"3'''-acetate; [cut]\"\"\"^^xsd:string .", iri, tf,
null));
o.annotationAssertionAxioms(s).forEach(
ax -> assertEquals("3'''-acetate; [cut]", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseFixedQuotesLiterals2() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(new StringDocumentSource(
"<urn:test#s> <urn:test#p> \"\"\" \"\"\\\" \"\"\" .", iri, tf, null));
o.annotationAssertionAxioms(s)
.forEach(ax -> assertEquals(" \"\"\" ", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseFixedQuotesLiterals3() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(new StringDocumentSource(
"<urn:test#s> <urn:test#p> \"\"\" \"\"\\u0061 \"\"\" .", iri, tf, null));
o.annotationAssertionAxioms(s)
.forEach(ax -> assertEquals(" \"\"a ", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseFixedQuotesLiterals4() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(new StringDocumentSource(
"<urn:test#s> <urn:test#p> \"\"\"\"\"\\\"\"\"\" .", iri, tf, null));
o.annotationAssertionAxioms(s)
.forEach(ax -> assertEquals("\"\"\"", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseFixedQuotesLiterals5() throws OWLOntologyCreationException {
OWLOntology o = loadOntologyFromString(new StringDocumentSource(
"<urn:test#s> <urn:test#p> \"\"\"\"\"\\u0061\"\"\" .", iri, tf, null));
o.annotationAssertionAxioms(s)
.forEach(ax -> assertEquals("\"\"a", ((OWLLiteral) ax.getValue()).getLiteral()));
}
@Test
public void shouldParseOntologyThatworked() {
// given
String working =
"@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n @prefix foaf: <http://xmlns.com/foaf/0.1/> .\n foaf:fundedBy rdfs:isDefinedBy <http://xmlns.com/foaf/0.1/> .";
OWLAxiom expected = AnnotationAssertion(df.getRDFSIsDefinedBy(),
IRI("http://xmlns.com/foaf/0.1/", "fundedBy"), IRI("http://xmlns.com/foaf/0.1/", ""));
// when
OWLOntology o = loadOntologyFromString(working, new TurtleDocumentFormat());
// then
assertTrue(o.containsAxiom(expected));
}
@Test
public void shouldParseOntologyThatBroke() {
// given
String input = "@prefix f: <urn:test/> . f:r f:p f: .";
OWLAxiom expected =
df.getOWLAnnotationAssertionAxiom(df.getOWLAnnotationProperty("urn:test/", "p"),
IRI("urn:test/", "r"), IRI("urn:test/", ""));
// when
OWLOntology o = loadOntologyFromString(input, new TurtleDocumentFormat());
// then
assertTrue(o.containsAxiom(expected));
}
@Test
public void shouldResolveAgainstBase() {
// given
String input = "@base <http://test.org/path#> .\n <a1> <b1> <c1> .";
// when
OWLOntology o = loadOntologyFromString(input, new TurtleDocumentFormat());
// then
String axioms = o.axioms().iterator().next().toString();
assertTrue(axioms.contains("http://test.org/a1"));
assertTrue(axioms.contains("http://test.org/b1"));
assertTrue(axioms.contains("http://test.org/c1"));
}
// test for 3543488
@Test
public void shouldRoundTripTurtleWithsharedBnodes() throws Exception {
masterConfigurator.withRemapAllAnonymousIndividualsIds(false);
try {
String input =
"@prefix ex: <http://example.com/test> .\n ex:ex1 a ex:Something ; ex:prop1 _:a .\n _:a a ex:Something1 ; ex:prop2 _:b .\n _:b a ex:Something ; ex:prop3 _:a .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLOntology onto2 = roundTrip(ontology, new TurtleDocumentFormat());
equal(ontology, onto2);
} finally {
masterConfigurator.withRemapAllAnonymousIndividualsIds(true);
}
}
// test for 335
@Test
public void shouldParseScientificNotation() {
String input =
"<http://dbpedia.org/resource/South_Africa> <http://dbpedia.org/ontology/areaTotal> 1e+07 .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLAnnotationProperty p =
AnnotationProperty(IRI("http://dbpedia.org/ontology/", "areaTotal"));
assertTrue(ontology.annotationPropertiesInSignature().anyMatch(ap -> ap.equals(p)));
IRI i = IRI("http://dbpedia.org/resource/", "South_Africa");
assertTrue(ontology
.containsAxiom(AnnotationAssertion(p, i, Literal("1.0E7", OWL2Datatype.XSD_DOUBLE))));
}
@Test
public void shouldParseScientificNotationWithMinus() {
String input =
"<http://dbpedia.org/resource/South_Africa> <http://dbpedia.org/ontology/areaTotal> 1e-07 .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLAnnotationProperty p =
AnnotationProperty(IRI("http://dbpedia.org/ontology/", "areaTotal"));
assertTrue(ontology.annotationPropertiesInSignature().anyMatch(ap -> ap.equals(p)));
IRI i = IRI("http://dbpedia.org/resource/", "South_Africa");
assertTrue(ontology
.containsAxiom(AnnotationAssertion(p, i, Literal("1.0E-7", OWL2Datatype.XSD_DOUBLE))));
}
@Test
public void shouldParseScientificNotationWithMinusFromBug() {
String input =
"<http://www.example.com/ontologies/2014/6/medicine#m.0hycptl> <http://www.example.com/ontologies/2014/6/medicine#medicine.drug_strength.strength_value> 8e-05 . \n"
+ " <http://www.example.com/ontologies/2014/6/medicine#m.0hyckjg> <http://www.example.com/ontologies/2014/6/medicine#medicine.drug_strength.strength_value> 0.03 . \n"
+ " <http://www.example.com/ontologies/2014/6/medicine#m.0hyckjg> <http://www.example.com/ontologies/2014/6/medicine#medicine.drug_strength.strength_value> 20.0 . \n"
+ " <http://www.example.com/ontologies/2014/6/medicine#m.0hyckjg> <http://www.example.com/ontologies/2014/6/medicine#medicine.drug_strength.strength_value> 30.0 . \n"
+ " <http://www.example.com/ontologies/2014/6/medicine#m.0hyckjg> <http://www.example.com/ontologies/2014/6/medicine#medicine.drug_strength.strength_value> 3.5 . ";
loadOntologyFromString(input, new TurtleDocumentFormat());
}
@Test
public void shouldParseTwo() {
String input =
"<http://dbpedia.org/resource/South_Africa> <http://dbpedia.org/ontology/areaTotal> 1 .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLAnnotationProperty p =
AnnotationProperty(IRI("http://dbpedia.org/ontology/", "areaTotal"));
assertTrue(ontology.annotationPropertiesInSignature().anyMatch(ap -> ap.equals(p)));
IRI i = IRI("http://dbpedia.org/resource/", "South_Africa");
assertTrue(ontology.containsAxiom(AnnotationAssertion(p, i, Literal(1))));
}
@Test
public void shouldParseOne() {
String input =
"<http://dbpedia.org/resource/South_Africa> <http://dbpedia.org/ontology/areaTotal> 1.0.";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLAnnotationProperty p =
AnnotationProperty(IRI("http://dbpedia.org/ontology/", "areaTotal"));
assertTrue(ontology.annotationPropertiesInSignature().anyMatch(ap -> ap.equals(p)));
IRI i = IRI("http://dbpedia.org/resource/", "South_Africa");
assertTrue(ontology
.containsAxiom(AnnotationAssertion(p, i, Literal("1.0", OWL2Datatype.XSD_DECIMAL))));
}
@Test
public void shouldParseEmptySpaceInBnode() {
String input =
"<http://taxonomy.wolterskluwer.de/practicearea/10112>\n a <http://schema.wolterskluwer.de/TaxonomyTerm> , <http://www.w3.org/2004/02/skos/core#Concept> ;\n"
+ " <http://www.w3.org/2004/02/skos/core#broader>\n [] ;\n"
+ " <http://www.w3.org/2004/02/skos/core#broader>\n [] .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLIndividual i =
NamedIndividual(IRI("http://taxonomy.wolterskluwer.de/practicearea/10112", ""));
OWLAnnotationProperty ap =
AnnotationProperty(IRI("http://www.w3.org/2004/02/skos/core#", "broader"));
OWLClass c = Class(IRI("http://www.w3.org/2004/02/skos/core#", "Concept"));
OWLClass term = Class(IRI("http://schema.wolterskluwer.de/", "TaxonomyTerm"));
assertTrue(ontology.containsAxiom(ClassAssertion(c, i)));
assertTrue(ontology.containsAxiom(ClassAssertion(term, i)));
assertTrue(ontology.containsEntityInSignature(ap));
}
@Test
public void shouldRoundTripAxiomAnnotation() throws Exception {
masterConfigurator.withRemapAllAnonymousIndividualsIds(false);
try {
String input = "@prefix : <urn:fm2#> .\n" + "@prefix fm: <urn:fm2#> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix prov: <urn:prov#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n"
+ "@base <urn:fm2> .\n\n" + "<http://www.ida.org/fm2.owl> rdf:type owl:Ontology.\n"
+ ":prov rdf:type owl:AnnotationProperty .\n\n"
+ ":Manage rdf:type owl:Class ; rdfs:subClassOf :ManagementType .\n"
+ "[ rdf:type owl:Axiom ;\n" + " owl:annotatedSource :Manage ;\n"
+ " owl:annotatedTarget :ManagementType ;\n"
+ " owl:annotatedProperty rdfs:subClassOf ;\n"
+ " :prov [\n prov:gen :FMDomain ;\n prov:att :DM .\n ]\n ] .\n"
+ ":ManagementType rdf:type owl:Class .\n"
+ ":DM rdf:type owl:NamedIndividual , prov:Person .\n"
+ ":FMDomain rdf:type owl:NamedIndividual , prov:Activity ; prov:ass :DM .";
OWLOntology ontology = loadOntologyFromString(input, new TurtleDocumentFormat());
OWLOntology o = roundTrip(ontology, new TurtleDocumentFormat());
equal(ontology, o);
Set<OWLSubClassOfAxiom> axioms = asUnorderedSet(o.axioms(AxiomType.SUBCLASS_OF));
assertEquals(1, axioms.size());
OWLAnnotation next = axioms.iterator().next().annotations().iterator().next();
assertTrue(next.getValue() instanceof OWLAnonymousIndividual);
OWLAnonymousIndividual ind = (OWLAnonymousIndividual) next.getValue();
Set<OWLAxiom> anns =
asUnorderedSet(o.axioms().filter(ax -> contains(ax.anonymousIndividuals(), ind)));
assertEquals(3, anns.size());
} finally {
masterConfigurator.withRemapAllAnonymousIndividualsIds(true);
}
}
@Test
public void shouldRoundTripAxiomAnnotationWithSlashOntologyIRI() throws Exception {
String input = "@prefix : <urn:test#test.owl/> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n"
+ "@base <urn:test#test.owl/> .\n" + "<urn:test#test.owl/> rdf:type owl:Ontology .\n"
+ ":q rdf:type owl:Class .\n" + ":t rdf:type owl:Class ; rdfs:subClassOf :q .";
OWLOntology in = loadOntologyFromString(input, new TurtleDocumentFormat());
String string = "urn:test#test.owl/";
OWLOntology ontology = getOWLOntology(IRI.create(string, ""));
ontology.add(
df.getOWLSubClassOfAxiom(df.getOWLClass(string, "t"), df.getOWLClass(string, "q")));
OWLOntology o = roundTrip(ontology, new TurtleDocumentFormat());
equal(o, in);
}
@Test
public void presentDeclaration() {
// given
String input =
"<urn:test#Settlement> rdf:type owl:Class.\n <urn:test#fm2.owl> rdf:type owl:Ontology.\n <urn:test#numberOfPads> rdf:type owl:ObjectProperty ;\n rdfs:domain <urn:test#Settlement> .";
// when
OWLOntology o = loadOntologyFromString(input, new TurtleDocumentFormat());
// then
o.logicalAxioms().forEach(ax -> assertTrue(ax instanceof OWLObjectPropertyDomainAxiom));
}
@Test
public void missingDeclaration() {
// given
String input =
"<urn:test#fm2.owl> rdf:type owl:Ontology.\n <urn:test#numberOfPads> rdf:type owl:ObjectProperty ;\n rdfs:domain <urn:test#Settlement> .";
// when
OWLOntology o = loadOntologyFromString(input, new TurtleDocumentFormat());
// then
o.logicalAxioms()
.forEach(ax -> assertTrue(ax.toString(), ax instanceof OWLObjectPropertyDomainAxiom));
}
@Test
public void shouldReloadSamePrefixAbbreviations() throws OWLOntologyStorageException {
String input = "@prefix : <http://www.hbp.FIXME.org/hbp_abam_ontology/> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n"
+ "@prefix nsu: <http://www.FIXME.org/nsupper#> .\n"
+ "@prefix ABA: <http://api.brain-map.org/api/v2/data/Structure/> .\n"
+ "@base <http://www.hbp.FIXME.org/hbp_abam_ontology> .\n"
+ "<http://www.hbp.FIXME.org/hbp_abam_ontology> rdf:type owl:Ontology .\n"
+ "ABA:1 rdf:type owl:Class ;\n"
+ " rdfs:subClassOf [ rdf:type owl:Restriction ; owl:onProperty nsu:part_of ; owl:someValuesFrom ABA:10 ] .\n"
+ "ABA:10 rdf:type owl:Class ;\n"
+ " rdfs:subClassOf [ rdf:type owl:Restriction ; owl:onProperty nsu:part_of ; owl:someValuesFrom owl:Thing ] .\n";
OWLOntology o = loadOntologyFromString(input, new RioTurtleDocumentFormat());
StringDocumentTarget t = saveOntology(o);
assertTrue(t.toString().contains("ABA:10"));
}
@Test
public void shouldFindExpectedAxiomsForBlankNodes() {
OWLObjectProperty r = ObjectProperty(
IRI.create("http://www.derivo.de/ontologies/examples/anonymous-individuals#", "r"));
String input =
"@prefix : <http://www.derivo.de/ontologies/examples/anonymous-individuals#> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n"
+ "<http://www.derivo.de/ontologies/examples/anonymous-individuals> a owl:Ontology .\n"
+ ":r a owl:ObjectProperty .\n" + ":C a owl:Class .\n"
+ "_:genid1 a :C ; :r _:genid1 .";
OWLOntology o = loadOntologyFromString(input, new TurtleDocumentFormat());
// assertEquals(input, saveOntology(o, new
// TurtleDocumentFormat()).toString().replaceAll("\\#.*\\n", ""));
o.axioms(AxiomType.CLASS_ASSERTION).forEach(ax -> {
OWLAxiom expected =
df.getOWLObjectPropertyAssertionAxiom(r, ax.getIndividual(), ax.getIndividual());
assertTrue(expected + " not found", o.containsAxiom(expected));
});
}
@Test
public void shouldAllowMultipleDotsInIRIs()
throws OWLOntologyCreationException, OWLOntologyStorageException {
IRI test1 = IRI.create("http://www.semanticweb.org/ontology#A...");
IRI test2 = IRI.create("http://www.semanticweb.org/ontology#A...B");
OWLOntology o = m.createOntology(IRI.create("http://www.semanticweb.org/ontology"));
m.addAxiom(o, df.getOWLDeclarationAxiom(df.getOWLClass(test1)));
m.addAxiom(o, df.getOWLDeclarationAxiom(df.getOWLClass(test2)));
TurtleDocumentFormat format = new TurtleDocumentFormat();
o.getPrefixManager().withDefaultPrefix("http://www.semanticweb.org/ontology#");
roundTrip(o, format);
}
@Test
public void shouldSaveWithCorrectPrefixes() throws OWLOntologyStorageException {
String in = "@prefix OBO: <http://purl.obolibrary.org/obo/> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n\n"
+ "<http://purl.obolibrary.org/obo/test.owl> rdf:type owl:Ontology .\n\n"
+ "<http://purl.obolibrary.org/obo/test#foo> rdf:type owl:ObjectProperty .\n\n"
+ "OBO:TEST_1 rdf:type owl:Class ;\n rdfs:label \"foo\"@en .";
OWLOntology ont = loadOntologyFromString(in, new TurtleDocumentFormat());
OWLDocumentFormat ofmt = new TurtleDocumentFormat();
ont.getPrefixManager().withPrefix("OBO", "http://purl.obolibrary.org/obo/");
StringDocumentTarget result = saveOntology(ont, ofmt);
OWLOntology o1 = loadOntologyFromString(result, new TurtleDocumentFormat());
equal(ont, o1);
}
@Test
public void shouldSaveWithCorrectSlashPrefixes() throws OWLOntologyStorageException {
String in = "@prefix OBO: <http://purl.obolibrary.org/obo/> .\n"
+ "@prefix owl: <http://www.w3.org/2002/07/owl#> .\n"
+ "@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .\n"
+ "@prefix xml: <http://www.w3.org/XML/1998/namespace> .\n"
+ "@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .\n"
+ "@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .\n\n"
+ "<http://purl.obolibrary.org/obo/test.owl> rdf:type owl:Ontology .\n\n"
+ "<http://purl.obolibrary.org/obo/test/foo> rdf:type owl:ObjectProperty .\n\n"
+ "OBO:TEST_1 rdf:type owl:Class ;\n rdfs:label \"foo\"@en .";
OWLOntology ont = loadOntologyFromString(in, new TurtleDocumentFormat());
OWLDocumentFormat ofmt = new TurtleDocumentFormat();
ont.getPrefixManager().withPrefix("OBO", "http://purl.obolibrary.org/obo/");
StringDocumentTarget result = saveOntology(ont, ofmt);
OWLOntology o1 = loadOntologyFromString(result, new TurtleDocumentFormat());
equal(ont, o1);
}
}