IonAnnotationRenderer.java

/*
 * Copyright 2006-2016 The MZmine 3 Development Team
 * 
 * This file is part of MZmine 3.
 * 
 * MZmine 3 is free software; you can redistribute it and/or modify it under the terms of the GNU
 * General Public License as published by the Free Software Foundation; either version 2 of the
 * License, or (at your option) any later version.
 * 
 * MZmine 3 is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without
 * even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License along with MZmine 3; if not,
 * write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301
 * USA
 */

package io.github.mzmine.modules.featuretable.renderers;

import java.util.List;

import io.github.msdk.datamodel.featuretables.FeatureTableRow;
import io.github.msdk.datamodel.ionannotations.IonAnnotation;
import javafx.scene.control.TreeTableCell;
import javafx.scene.control.TreeTableColumn;
import javafx.util.Callback;

public class IonAnnotationRenderer implements
    Callback<TreeTableColumn<FeatureTableRow, Object>, TreeTableCell<FeatureTableRow, Object>> {

  @Override
  public TreeTableCell<FeatureTableRow, Object> call(TreeTableColumn<FeatureTableRow, Object> p) {
    return new TreeTableCell<FeatureTableRow, Object>() {
      @Override
      public void updateItem(Object object, boolean empty) {
        super.updateItem(object, empty);
        setStyle("-fx-alignment: CENTER-LEFT;"
            + "-fx-border-color: transparent -fx-table-cell-border-color -fx-table-cell-border-color transparent;");
        if (object == null) {
          setText(null);
        } else {
          List<IonAnnotation> ionAnnotations = (List<IonAnnotation>) object;
          String value = "";
          for (IonAnnotation ionAnnotation : ionAnnotations) {
            if (value != "")
              value = value + "\n";

            if (ionAnnotation.getDescription() != null)
              value = value + ionAnnotation.getDescription();
            else
              value = value + ionAnnotation.getAnnotationId();
          }
          setText(value);
        }
      }
    };
  }

}