/*
 * This is eMonocot, a global online biodiversity information resource.
 *
 * Copyright © 2011–2015 The Board of Trustees of the Royal Botanic Gardens, Kew and The University of Oxford
 *
 * eMonocot is free software: you can redistribute it and/or modify it under the terms of the
 * GNU Affero General Public License as published by the Free Software Foundation, either version 3
 * of the License, or (at your option) any later version.
 *
 * eMonocot is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even
 * the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
 * GNU Affero General Public License for more details.
 *
 * The complete text of the GNU Affero General Public License is in the source repository as the file
 * ‘COPYING’.  It is also available from <http://www.gnu.org/licenses/>.
 */
package org.emonocot.job.dwc.taxon;

import org.emonocot.api.AnnotationService;
import org.emonocot.api.TaxonService;
import org.emonocot.harvest.common.AuthorityAware;
import org.emonocot.job.dwc.exception.CannotFindRecordException;
import org.emonocot.job.dwc.exception.NoIdentifierException;
import org.emonocot.job.dwc.exception.TaxonAlreadyProcessedException;
import org.emonocot.job.dwc.exception.UnexpectedTaxonException;
import org.emonocot.model.Annotation;
import org.emonocot.model.Taxon;
import org.emonocot.model.constants.AnnotationCode;
import org.emonocot.model.constants.AnnotationType;
import org.emonocot.model.constants.RecordType;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.batch.item.ItemProcessor;
import org.springframework.beans.factory.annotation.Autowired;

/**
 *
 * @author ben
 *
 */
public class CheckingProcessor extends AuthorityAware implements ItemProcessor<Taxon,Annotation> {
	/**
	 *
	 */
	private Logger logger = LoggerFactory.getLogger(CheckingProcessor.class);

	private TaxonService taxonService;

	private AnnotationService annotationService;

	@Autowired
	public void setTaxonService(TaxonService taxonService) {
		this.taxonService = taxonService;
	}

	@Autowired
	public void setAnnotationService(AnnotationService annotationService) {
		this.annotationService = annotationService;
	}

	/**
	 * @param taxon a taxon object
	 * @throws Exception if something goes wrong
	 * @return Taxon a taxon object
	 */
	public final Annotation process(final Taxon taxon) throws Exception {
		logger.info("Processing " + taxon.getIdentifier());
		if (taxon.getIdentifier() == null || taxon.getIdentifier().isEmpty()) {
			throw new NoIdentifierException(taxon);
		}
		Taxon persistedTaxon = taxonService.find(taxon.getIdentifier());
		if (persistedTaxon == null) {
			throw new CannotFindRecordException(taxon.getIdentifier(), taxon.toString());
		}

		Annotation annotation = annotationService.findAnnotation(RecordType.Taxon,persistedTaxon.getId(), getStepExecution().getJobExecutionId());

		if (annotation == null) {
			logger.warn(taxon.getIdentifier() + " was not expected");
			throw new UnexpectedTaxonException(taxon);
		} else {
			if (annotation.getCode().equals(AnnotationCode.Present)) {
				throw new TaxonAlreadyProcessedException(taxon);
			}
			annotation.setType(AnnotationType.Info);
			annotation.setCode(AnnotationCode.Present);
			logger.info(taxon.getIdentifier() + " was expected");
		}
		return annotation;
	}
}