/**
* Copyright (C) 2012-2013 Selventa, Inc.
*
* This file is part of the OpenBEL Framework.
*
* This program is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* The OpenBEL Framework is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
* License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with the OpenBEL Framework. If not, see <http://www.gnu.org/licenses/>.
*
* Additional Terms under LGPL v3:
*
* This license does not authorize you and you are prohibited from using the
* name, trademarks, service marks, logos or similar indicia of Selventa, Inc.,
* or, in the discretion of other licensors or authors of the program, the
* name, trademarks, service marks, logos or similar indicia of such authors or
* licensors, in any marketing or advertising materials relating to your
* distribution of the program or any covered product. This restriction does
* not waive or limit your obligation to keep intact all copyright notices set
* forth in the program as delivered to you.
*
* If you distribute the program in whole or in part, or any modified version
* of the program, and you assume contractual liability to the recipient with
* respect to the program or modified version, then you will indemnify the
* authors and licensors of the program for any liabilities that these
* contractual assumptions directly impose on those licensors and authors.
*/
package org.openbel.framework.core.protonetwork;
import static org.openbel.framework.common.BELUtilities.createDirectories;
import org.openbel.framework.common.model.Document;
import org.openbel.framework.common.protonetwork.model.ProtoNetwork;
import org.openbel.framework.common.protonetwork.model.ProtoNetworkError;
/**
* Proto-network service implementation.
*
* @author Anthony Bargnesi {@code <abargnesi@selventa.com>}
*/
public class ProtoNetworkServiceImpl implements ProtoNetworkService {
/**
* {@inheritDoc}
*/
@Override
public ProtoNetwork compile(Document document) {
ProtoNetworkBuilder protoNetworkBuilder = new ProtoNetworkBuilder(
document);
return protoNetworkBuilder.buildProtoNetwork();
}
/**
* {@inheritDoc}
*/
@Override
public ProtoNetwork read(ProtoNetworkDescriptor descriptor)
throws ProtoNetworkError {
ProtoNetworkExternalizer ext = new BinaryProtoNetworkExternalizer();
return ext.readProtoNetwork(descriptor);
}
/**
* {@inheritDoc}
*/
@Override
public ProtoNetworkDescriptor write(String protoNetworkRoot,
ProtoNetwork protoNetwork) throws ProtoNetworkError {
createDirectories(protoNetworkRoot);
BinaryProtoNetworkExternalizer binaryExternalizer =
new BinaryProtoNetworkExternalizer();
ProtoNetworkDescriptor protoNetworkDescriptor = binaryExternalizer
.writeProtoNetwork(protoNetwork, protoNetworkRoot);
return protoNetworkDescriptor;
}
/**
* {@inheritDoc}
*/
@Override
public void merge(ProtoNetwork protoNetworkDestination,
ProtoNetwork protoNetworkSource) {
if (protoNetworkSource == null) {
return;
}
ProtoNetworkMerger protoNetworkMerger = new ProtoNetworkMerger();
protoNetworkMerger.merge(protoNetworkDestination, protoNetworkSource);
}
}