/**
* Copyright (C) 2012-2013 Selventa, Inc.
*
* This file is part of the OpenBEL Framework.
*
* This program is free software; you can redistribute it and/or modify it
* under the terms of the GNU Lesser General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* The OpenBEL Framework is distributed in the hope that it will be useful, but
* WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public
* License for more details.
*
* You should have received a copy of the GNU Lesser General Public License
* along with the OpenBEL Framework. If not, see <http://www.gnu.org/licenses/>.
*
* Additional Terms under LGPL v3:
*
* This license does not authorize you and you are prohibited from using the
* name, trademarks, service marks, logos or similar indicia of Selventa, Inc.,
* or, in the discretion of other licensors or authors of the program, the
* name, trademarks, service marks, logos or similar indicia of such authors or
* licensors, in any marketing or advertising materials relating to your
* distribution of the program or any covered product. This restriction does
* not waive or limit your obligation to keep intact all copyright notices set
* forth in the program as delivered to you.
*
* If you distribute the program in whole or in part, or any modified version
* of the program, and you assume contractual liability to the recipient with
* respect to the program or modified version, then you will indemnify the
* authors and licensors of the program for any liabilities that these
* contractual assumptions directly impose on those licensors and authors.
*/
package org.openbel.framework.common.lang;
import org.openbel.framework.common.Strings;
/**
* Denotes a covalently modified protein abundance.
* <p>
* Function {@link Signature signature(s)}:
*
* <pre>
* proteinModification()proteinModification
* proteinModification(E:phosphorylation)proteinModification
* proteinModification(E:phosphorylation,E:phosphorylation)proteinModification
* </pre>
*
* </p>
*
* @see Signature
*/
public class ProteinModification extends Function {
/**
* {@link Strings#PROTEIN_MODIFICATION}
*/
public final static String NAME;
/**
* {@link Strings#MODIFICATION_ABBREV}
*/
public final static String ABBREVIATION;
/**
* Function description.
*/
public final static String DESC;
static {
NAME = Strings.PROTEIN_MODIFICATION;
ABBREVIATION = Strings.PROTEIN_MODIFICATION_ABBREV;
DESC = "Denotes a covalently modified protein abundance";
}
public ProteinModification() {
super(NAME, ABBREVIATION, DESC,
"proteinModification(E:*)proteinModification",
"proteinModification(E:*,E:*)proteinModification",
"proteinModification(E:*,E:*,E:*)proteinModification");
}
/**
* {@inheritDoc}
*/
@Override
public boolean validArgumentCount(int count) {
switch (count) {
case 1:
case 2:
case 3:
return true;
default:
return false;
}
}
}