/**
* The contents of this file are subject to the license and copyright
* detailed in the LICENSE and NOTICE files at the root of the source
* tree and available online at
*
* http://www.dspace.org/license/
*/
package org.dspace.rdf;
import com.hp.hpl.jena.rdf.model.Model;
import java.sql.SQLException;
import java.util.Deque;
import java.util.LinkedList;
import java.util.NoSuchElementException;
import org.apache.log4j.Logger;
import org.dspace.authorize.AuthorizeException;
import org.dspace.content.Bitstream;
import org.dspace.content.Bundle;
import org.dspace.content.DSpaceObject;
import org.dspace.content.Item;
import org.dspace.content.Site;
import org.dspace.content.WorkspaceItem;
import org.dspace.core.Constants;
import org.dspace.core.Context;
import org.dspace.event.Consumer;
import org.dspace.event.Event;
/**
*
* @author Pascal-Nicolas Becker (dspace -at- pascal -hyphen- becker -dot- de)
*/
public class RDFConsumer implements Consumer
{
private static final Logger log = Logger.getLogger(RDFConsumer.class);
protected Deque<DSOIdentifier> toConvert;
protected Deque<DSOIdentifier> toDelete;
@Override
public void consume(Context ctx, Event event)
throws SQLException
{
if (this.toConvert == null)
{
log.debug("Initalized first queue.");
this.toConvert = new LinkedList<>();
}
if (this.toDelete == null)
{
log.debug("Initalized second queue.");
this.toDelete = new LinkedList<>();
}
int sType = event.getSubjectType();
log.debug(event.getEventTypeAsString() + " for "
+ event.getSubjectTypeAsString() + ":" + event.getSubjectID());
switch (sType)
{
case (Constants.BITSTREAM) :
{
this.consumeBitstream(ctx, event);
}
case (Constants.BUNDLE) :
{
this.consumeBundles(ctx, event);
return;
}
case (Constants.ITEM) :
{
this.consumeCommunityCollectionItem(ctx, event);
return;
}
case (Constants.COLLECTION) :
{
this.consumeCommunityCollectionItem(ctx, event);
return;
}
case (Constants.COMMUNITY) :
{
this.consumeCommunityCollectionItem(ctx, event);
return;
}
case (Constants.SITE) :
{
this.consumeSite(ctx,event);
return;
}
default:
{
log.warn("RDFConsumer should not have been given this kind of "
+ "subject in an event, skipping: " + event.toString());
}
}
}
public void consumeBitstream(Context ctx, Event event) throws SQLException
{
if (event.getEventType() == Event.MODIFY
|| event.getEventType() == Event.MODIFY_METADATA)
{
Bitstream bitstream = Bitstream.find(ctx, event.getSubjectID());
if (bitstream == null)
{
log.debug("Cannot find bitstream " + event.getSubjectID() + "! "
+ "Ignoring, as it is likely it was deleted "
+ "and we'll cover it by a REMOVE event on its bundle.");
return;
}
Bundle[] bundles = bitstream.getBundles();
for (Bundle b : bundles)
{
Item[] items = b.getItems();
for (Item i : items)
{
if (WorkspaceItem.findByItem(ctx, i) != null)
{
log.debug("Ignoring Item " + i.getID() + " as a corresponding workspace item exists.");
continue;
}
DSOIdentifier id = new DSOIdentifier(i, ctx);
if (!this.toDelete.contains(id) && !this.toConvert.contains(id))
{
this.toConvert.addLast(id);
}
}
}
return;
}
// ignore create and delete event on Bitstreams, as they should be
// reported as ADD and REMOVE on their bundles as well.
if (event.getEventType() == Event.CREATE
|| event.getEventType() == Event.DELETE)
{
return;
}
// Events of type ADD and REMOVE does currently (DSpace 4.1) not exist
// on a bitstream
log.warn("Got an unexpected event type (" + event.getEventTypeAsString()
+ ") for a bitstream. Ignoring.");
}
public void consumeBundles(Context ctx, Event event) throws SQLException
{
if (event.getEventType() == Event.ADD
|| event.getEventType() == Event.REMOVE
|| event.getEventType() == Event.MODIFY
|| event.getEventType() == Event.MODIFY_METADATA)
{
// either a Bitstream was added or removed or the Bundle was changed
// update its item.
Bundle bundle = Bundle.find(ctx, event.getSubjectID());
if (bundle == null)
{
log.debug("Cannot find bundle " + event.getSubjectID() + "! "
+ "Ignoring, as it is likely it was deleted "
+ "and we'll cover it by a REMOVE event on its item.");
return;
}
Item[] items = bundle.getItems();
for (Item i : items)
{
if (WorkspaceItem.findByItem(ctx, i) != null)
{
log.debug("Ignoring Item " + i.getID() + " as a corresponding workspace item exists.");
continue;
}
DSOIdentifier id = new DSOIdentifier(i, ctx);
if (!this.toDelete.contains(id) && !this.toConvert.contains(id))
{
this.toConvert.addLast(id);
}
}
}
// ignore create and delete event on Bundles, as they should be
// reported as ADD and REMOVE on their items as well.
if (event.getEventType() == Event.CREATE
|| event.getEventType() == Event.DELETE)
{
return;
}
log.warn("Got an unexpected event type (" + event.getEventTypeAsString()
+ ") for a bundle. Ignoring.");
}
public void consumeCommunityCollectionItem(Context ctx, Event event) throws SQLException
{
if (event.getSubjectType() != Constants.COMMUNITY
&& event.getSubjectType() != Constants.COLLECTION
&& event.getSubjectType() != Constants.ITEM)
{
log.error("Called on an unexpected Event with subject type "
+ event.getSubjectTypeAsString() + " and event type "
+ event.getEventTypeAsString() + ", ignoring.");
return;
}
if (event.getEventType() == Event.DELETE)
{
DSOIdentifier id = new DSOIdentifier(event.getSubjectType(),
event.getSubjectID(), event.getDetail(), event.getIdentifiers());
if (this.toConvert.contains(id))
{
this.toConvert.remove(id);
}
if (!this.toDelete.contains(id))
{
this.toDelete.addLast(id);
}
return;
}
if (event.getEventType() == Event.MODIFY
|| event.getEventType() == Event.MODIFY_METADATA
|| event.getEventType() == Event.ADD
|| event.getEventType() == Event.REMOVE
|| event.getEventType() == Event.CREATE)
{
// we have to find the dso as the handle is set as detail only
// if the event type is delete.
DSpaceObject dso = event.getSubject(ctx);
if (dso == null)
{
log.debug("Cannot find " + event.getSubjectTypeAsString() + " "
+ event.getSubjectID() + "! " + "Ignoring, as it is "
+ "likely it was deleted and we'll cover it by another "
+ "event with the type REMOVE.");
return;
}
// ignore unfinished submissions here. Every unfinished submission
// has an workspace item. The item flag "in_archive" doesn't help us
// here as this is also set to false if a newer version was submitted.
if (dso instanceof Item
&& WorkspaceItem.findByItem(ctx, (Item) dso) != null)
{
log.debug("Ignoring Item " + dso.getID() + " as a corresponding workspace item exists.");
return;
}
DSOIdentifier id = new DSOIdentifier(dso, ctx);
// If an item gets withdrawn, a MODIFIY event is fired. We have to
// delete the item from the triple store instead of converting it.
// we don't have to take care for reinstantions of items as they can
// be processed as normal modify events.
if (dso instanceof Item
&& event.getDetail() != null
&& event.getDetail().equals("WITHDRAW"))
{
if (this.toConvert.contains(id))
{
this.toConvert.remove(id);
}
if (!this.toDelete.contains(id))
{
this.toDelete.add(id);
return;
}
}
if (!this.toDelete.contains(id)
&& !this.toConvert.contains(id))
{
this.toConvert.addLast(id);
}
}
}
public void consumeSite(Context ctx, Event event)
{
// in case a top level community was added or remove.
// event type remove won't be thrown until DS-1966 is fixed (f.e. by
// merging PR #517).
if (event.getEventType() == Event.ADD
|| event.getEventType() == Event.REMOVE)
{
DSOIdentifier id = new DSOIdentifier(Constants.SITE,
Site.SITE_ID, Site.getSiteHandle(), new String[] {Site.getSiteHandle()});
if (!this.toConvert.contains(id)) this.toConvert.add(id);
return;
}
log.warn("Got an unexpected Event for the SITE. Event type is "
+ event.getEventTypeAsString() + ", ignoring.");
}
@Override
public void end(Context ctx) throws Exception {
log.debug("Started processing of queued events.");
// create a new context, to be sure to work as anonymous user
// we don't want to store private data in a triplestore with public
// SPARQL endpoint.
ctx = new Context(Context.READ_ONLY);
if (toDelete == null)
{
log.debug("Deletion queue does not exists, creating empty queue.");
this.toDelete = new LinkedList<>();
}
if (toConvert != null)
{
log.debug("Starting conversion of DSpaceObjects.");
while (true)
{
DSOIdentifier id;
try { id = toConvert.removeFirst(); }
catch (NoSuchElementException ex) { break; }
if (toDelete.contains(id))
{
log.debug("Skipping " + Constants.typeText[id.type] + " "
+ Integer.toString(id.id) + " as it is marked for "
+ "deletion as well.");
continue;
}
log.debug("Converting " + Constants.typeText[id.type] + " "
+ Integer.toString(id.id) + ".");
convert(ctx, id);
}
log.debug("Conversion ended.");
}
log.debug("Starting to delete data from the triple store...");
while (true)
{
DSOIdentifier id;
try { id = toDelete.removeFirst(); }
catch (NoSuchElementException ex) { break; }
log.debug("Going to delete data from " +
Constants.typeText[id.type] + " "
+ Integer.toString(id.id) + ".");
delete(ctx, id);
}
ctx.abort();
log.debug("Deletion finished.");
}
void convert(Context ctx, DSOIdentifier id) throws SQLException
{
Model m = null;
try
{
if (id.type == Constants.SITE)
{
m = RDFUtil.convertAndStore(ctx, Site.find(ctx, 0));
return;
}
DSpaceObject dso = DSpaceObject.find(ctx, id.type, id.id);
if (dso == null)
{
log.error("Cannot find " + Constants.typeText[id.type]
+ " " + id.id + " unexpectedly! Will delete all "
+ "information about it in the triple store.");
toDelete.add(id);
return;
}
m = RDFUtil.convertAndStore(ctx, dso);
}
catch(AuthorizeException ex)
{
log.debug(Constants.typeText[id.type] + " " +
Integer.toString(id.id) + " couldn't be converted: "
+ "anonymous user doesn't have read permsission. "
+ ex.getMessage());
toDelete.add(id);
}
catch (IllegalArgumentException ex)
{
log.error("Ignoring an unexpected IllegalArgumentException: "
+ ex.getMessage(), ex);
}
catch (ItemNotArchivedException ex)
{
log.info("Anonymous user cannot read "
+ Constants.typeText[id.type] + " "
+ Integer.toString(id.id)
+ ": deleting it from the triplestore.");
toDelete.add(id);
}
catch (ItemNotDiscoverableException ex)
{
log.info("Item " + Integer.toString(id.id) + " is not "
+ "discoverable: deleting it from the triplestore.");
toDelete.add(id);
}
catch (ItemWithdrawnException ex)
{
log.info("Item " + Integer.toString(id.id) + " is withdrawn: "
+ "deleting it from the triplestore.");
toDelete.add(id);
}
catch (RDFMissingIdentifierException ex)
{
log.warn("Cannot convert " + Constants.typeText[id.type]
+ " " + Integer.toString(id.id) + ", as no RDF "
+ "identifier could be generated: "
+ ex.getMessage(), ex);
}
finally
{
if (m != null)
{
m.close();
}
}
}
void delete(Context context, DSOIdentifier id)
throws SQLException {
try
{
RDFUtil.delete(context, id.type, id.id, id.handle, id.identifiers);
}
catch (RDFMissingIdentifierException ex)
{
log.warn("Cannot delete " + Constants.typeText[id.type] + " "
+ Integer.toString(id.id) + ": "
+ ex.getMessage(), ex);
}
}
@Override
public void finish(Context ctx) throws Exception {
}
@Override
public void initialize() throws Exception {
}
class DSOIdentifier
{
int type;
int id;
String handle;
String[] identifiers;
DSOIdentifier(int type, int id, String handle, String[] identifiers)
{
this.type = type;
this.id = id;
this.handle = handle;
this.identifiers = identifiers;
}
DSOIdentifier(DSpaceObject dso, Context ctx)
{
if (dso.getType() != Constants.SITE
&& dso.getType() != Constants.COMMUNITY
&& dso.getType() != Constants.COLLECTION
&& dso.getType() != Constants.ITEM)
{
throw new IllegalArgumentException("Provided DSpaceObject does"
+ " not have a handle!");
}
this.type = dso.getType();
this.id = dso.getID();
this.handle = dso.getHandle();
this.identifiers = dso.getIdentifiers(ctx);
}
@Override
public boolean equals(Object o)
{
if (!(o instanceof DSOIdentifier)) return false;
DSOIdentifier dsoId = (DSOIdentifier) o;
/*
log.warn("Testing if " + Constants.typeText[this.type] + " "
+ Integer.toString(this.id) + " and "
+ Constants.typeText[dsoId.type] + " "
+ Integer.toString(dsoId.id) + " are equal.");
*/
return (this.type == dsoId.type && this.id == dsoId.id);
}
@Override
public int hashCode()
{
/* log.debug("Created hash " + Integer.toString(this.type + (10*this.id)));*/
// as at least up to DSpace version 4.1 DSpaceObjectType is a
// one-digit number, this should produce an distinct hash.
return this.type + (10*this.id);
}
}
}