/** * This Source Code Form is subject to the terms of the Mozilla Public License, * v. 2.0. If a copy of the MPL was not distributed with this file, You can * obtain one at http://mozilla.org/MPL/2.0/. OpenMRS is also distributed under * the terms of the Healthcare Disclaimer located at http://openmrs.org/license. * * Copyright (C) OpenMRS Inc. OpenMRS is a registered trademark and the OpenMRS * graphic logo is a trademark of OpenMRS Inc. */ package org.openmrs.util.databasechange; import java.sql.PreparedStatement; import java.sql.SQLException; import java.sql.Types; import java.util.Set; import org.apache.commons.lang3.StringUtils; import org.openmrs.util.DatabaseUtil; import org.openmrs.util.UpgradeUtil; import liquibase.change.custom.CustomTaskChange; import liquibase.database.Database; import liquibase.database.jvm.JdbcConnection; import liquibase.exception.CustomChangeException; import liquibase.exception.DatabaseException; import liquibase.exception.SetupException; import liquibase.exception.ValidationErrors; import liquibase.resource.ResourceAccessor; public class MigrateDrugOrderFrequencyToCodedOrderFrequencyChangeset implements CustomTaskChange { @Override public void execute(Database database) throws CustomChangeException { JdbcConnection connection = (JdbcConnection) database.getConnection(); try { Set<String> uniqueFrequencies = DatabaseUtil.getUniqueNonNullColumnValues("frequency_text", "drug_order", String.class, connection.getUnderlyingConnection()); migrateFrequenciesToCodedValue(connection, uniqueFrequencies); } catch (Exception e) { throw new CustomChangeException(e); } } private void migrateFrequenciesToCodedValue(JdbcConnection connection, Set<String> uniqueFrequencies) throws CustomChangeException, SQLException, DatabaseException { PreparedStatement updateDrugOrderStatement = null; Boolean autoCommit = null; try { autoCommit = connection.getAutoCommit(); connection.setAutoCommit(false); updateDrugOrderStatement = connection .prepareStatement("update drug_order set frequency = ? where frequency_text = ?"); updateDrugOrderStatement.setNull(1, Types.INTEGER); updateDrugOrderStatement.setNull(2, Types.VARCHAR); updateDrugOrderStatement.executeUpdate(); updateDrugOrderStatement.clearParameters(); for (String frequency : uniqueFrequencies) { if (StringUtils.isBlank(frequency)) { updateDrugOrderStatement.setNull(1, Types.INTEGER); } else { Integer conceptIdForFrequency = UpgradeUtil.getConceptIdForUnits(frequency); if (conceptIdForFrequency == null) { throw new CustomChangeException("No concept mapping found for frequency: " + frequency); } Integer orderFrequencyId = UpgradeUtil.getOrderFrequencyIdForConceptId(connection .getUnderlyingConnection(), conceptIdForFrequency); if (orderFrequencyId == null) { throw new CustomChangeException("No order frequency found for concept " + conceptIdForFrequency); } updateDrugOrderStatement.setInt(1, orderFrequencyId); } updateDrugOrderStatement.setString(2, frequency); updateDrugOrderStatement.executeUpdate(); updateDrugOrderStatement.clearParameters(); } connection.commit(); } catch (DatabaseException e) { handleError(connection, e); } catch (SQLException e) { handleError(connection, e); } finally { if (autoCommit != null) { connection.setAutoCommit(autoCommit); } if (updateDrugOrderStatement != null) { updateDrugOrderStatement.close(); } } } private void handleError(JdbcConnection connection, Exception e) throws DatabaseException, CustomChangeException { connection.rollback(); throw new CustomChangeException(e); } @Override public String getConfirmationMessage() { return "Finished migrating drug order frequencies to coded order frequencies"; } @Override public void setUp() throws SetupException { } @Override public void setFileOpener(ResourceAccessor resourceAccessor) { } @Override public ValidationErrors validate(Database database) { return null; } }