/*
Copyright 2008-2010 Gephi
Authors : Mathieu Bastian <mathieu.bastian@gephi.org>
Website : http://www.gephi.org
This file is part of Gephi.
DO NOT ALTER OR REMOVE COPYRIGHT NOTICES OR THIS HEADER.
Copyright 2011 Gephi Consortium. All rights reserved.
The contents of this file are subject to the terms of either the GNU
General Public License Version 3 only ("GPL") or the Common
Development and Distribution License("CDDL") (collectively, the
"License"). You may not use this file except in compliance with the
License. You can obtain a copy of the License at
http://gephi.org/about/legal/license-notice/
or /cddl-1.0.txt and /gpl-3.0.txt. See the License for the
specific language governing permissions and limitations under the
License. When distributing the software, include this License Header
Notice in each file and include the License files at
/cddl-1.0.txt and /gpl-3.0.txt. If applicable, add the following below the
License Header, with the fields enclosed by brackets [] replaced by
your own identifying information:
"Portions Copyrighted [year] [name of copyright owner]"
If you wish your version of this file to be governed by only the CDDL
or only the GPL Version 3, indicate your decision by adding
"[Contributor] elects to include this software in this distribution
under the [CDDL or GPL Version 3] license." If you do not indicate a
single choice of license, a recipient has the option to distribute
your version of this file under either the CDDL, the GPL Version 3 or
to extend the choice of license to its licensees as provided above.
However, if you add GPL Version 3 code and therefore, elected the GPL
Version 3 license, then the option applies only if the new code is
made subject to such option by the copyright holder.
Contributor(s):
Portions Copyrighted 2011 Gephi Consortium.
*/
package org.gephi.layout.plugin.openord;
import java.util.ArrayDeque;
/**
*
* @author Mathieu Bastian
*/
public class DensityGrid implements Cloneable {
private static final int GRID_SIZE = 1000; // size of Density grid
private static final float VIEW_SIZE = 4000; // actual physical size of layout plane
private static final int RADIUS = 10; // radius for density fall-off:
private static final int HALF_VIEW = 2000;
private static final float VIEW_TO_GRID = 0.25f;
private float[][] density;
private float[][] fallOff;
private ArrayDeque<Node>[][] bins;
public void init() {
density = new float[GRID_SIZE][GRID_SIZE];
fallOff = new float[RADIUS * 2 + 1][RADIUS * 2 + 1];
bins = new ArrayDeque[GRID_SIZE][GRID_SIZE];
for (int i = -RADIUS; i <= RADIUS; i++) {
for (int j = -RADIUS; j <= RADIUS; j++) {
fallOff[i + RADIUS][j + RADIUS] = (float) ((RADIUS - Math.abs((float) i)) / RADIUS)
* (float) ((RADIUS - Math.abs((float) j)) / RADIUS);
}
}
/*for (int i = 0; i < GRID_SIZE; i++) {
for (int j = 0; j < GRID_SIZE; j++) {
bins[i][j] = new ArrayDeque<Node>();
}
}*/
}
public float getDensity(float nX, float nY, boolean fineDensity) {
int xGrid, yGrid;
float xDist, yDist, distance, density = 0;
int boundary = 10; // boundary around plane
xGrid = (int) ((nX + HALF_VIEW + .5) * VIEW_TO_GRID);
yGrid = (int) ((nY + HALF_VIEW + .5) * VIEW_TO_GRID);
// Check for edges of density grid (10000 is arbitrary high density)
if (xGrid > GRID_SIZE - boundary || xGrid < boundary) {
return 10000;
}
if (yGrid > GRID_SIZE - boundary || yGrid < boundary) {
return 10000;
}
if (fineDensity) {
for (int i = yGrid - 1; i <= yGrid + 1; i++) {
for (int j = xGrid - 1; j <= xGrid + 1; j++) {
ArrayDeque<Node> deque = bins[i][j];
if (deque != null) {
for (Node bi : deque) {
xDist = nX - bi.x;
yDist = nY - bi.y;
distance = xDist * xDist + yDist * yDist;
density += 1e-4 / (distance + 1e-50);
}
}
}
}
} else {
density = this.density[yGrid][xGrid];
density *= density;
}
return density;
}
public void add(Node n, boolean fineDensity) {
if (fineDensity) {
fineAdd(n);
} else {
add(n);
}
}
public void substract(Node n, boolean firstAdd, boolean fineFirstAdd, boolean fineDensity) {
if (fineDensity && !fineFirstAdd) {
fineSubstract(n);
} else if (!firstAdd) {
substract(n);
}
}
private void substract(Node n) {
int xGrid, yGrid, diam;
xGrid = (int) ((n.subX + HALF_VIEW + 0.5f) * VIEW_TO_GRID);
yGrid = (int) ((n.subY + HALF_VIEW + 0.5f) * VIEW_TO_GRID);
xGrid -= RADIUS;
yGrid -= RADIUS;
diam = 2 * RADIUS;
for (int i = 0; i <= diam; i++) {
int oldXGrid = xGrid;
for (int j = 0; j <= diam; j++) {
density[yGrid][xGrid] -= fallOff[i][j];
xGrid++;
}
yGrid++;
xGrid = oldXGrid;
}
}
private void add(Node n) {
int xGrid, yGrid, diam;
xGrid = (int) ((n.x + HALF_VIEW + .5) * VIEW_TO_GRID);
yGrid = (int) ((n.y + HALF_VIEW + .5) * VIEW_TO_GRID);
n.subX = n.x;
n.subY = n.y;
xGrid -= RADIUS;
yGrid -= RADIUS;
diam = 2 * RADIUS;
if ((xGrid + RADIUS >= GRID_SIZE) || (xGrid < 0)
|| (yGrid + RADIUS >= GRID_SIZE) || (yGrid < 0)) {
throw new RuntimeException("Error: Exceeded density grid with "
+ "xGrid = " + xGrid + " and yGrid = " + yGrid);
}
for (int i = 0; i <= diam; i++) {
int oldXGrid = xGrid;
for (int j = 0; j <= diam; j++) {
density[yGrid][xGrid] += fallOff[i][j];
xGrid++;
}
yGrid++;
xGrid = oldXGrid;
}
}
private void fineSubstract(Node n) {
int xGrid, yGrid;
xGrid = (int) ((n.subX + HALF_VIEW + .5) * VIEW_TO_GRID);
yGrid = (int) ((n.subY + HALF_VIEW + .5) * VIEW_TO_GRID);
ArrayDeque<Node> deque = bins[yGrid][xGrid];
if (deque != null) {
deque.pollFirst();
}
}
private void fineAdd(Node n) {
int xGrid, yGrid;
xGrid = (int) ((n.x + HALF_VIEW + .5) * VIEW_TO_GRID);
yGrid = (int) ((n.y + HALF_VIEW + .5) * VIEW_TO_GRID);
n.subX = n.x;
n.subY = n.y;
ArrayDeque<Node> deque = bins[yGrid][xGrid];
if (deque == null) {
deque = new ArrayDeque<>();
bins[yGrid][xGrid] = deque;
}
deque.addLast(n);
}
public static float getViewSize() {
return (VIEW_SIZE * 0.8f) - (RADIUS / 0.25f) * 2f;
}
/*@Override
protected DensityGrid clone() {
DensityGrid densityGrid = new DensityGrid();
densityGrid.fallOff = this.fallOff;
densityGrid.density = new float[GRID_SIZE][GRID_SIZE];
densityGrid.bins = new ArrayDeque[GRID_SIZE][GRID_SIZE];
for (int i = 0; i < GRID_SIZE; i++) {
System.arraycopy(this.density[i], 0, densityGrid.density[i], 0, GRID_SIZE);
for (int j = 0; j < GRID_SIZE; j++) {
densityGrid.bins[i][j] = bins[i][j].clone();
}
}
return densityGrid;
}*/
}