/*
* Copyright 2015-2016 OpenCB
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.opencb.opencga.storage.core.variant.io.json.mixin;
import com.fasterxml.jackson.annotation.JsonIgnore;
import org.opencb.biodata.models.variant.stats.VariantStats;
import java.util.Map;
import java.util.Set;
/**
* @author Cristina Yenyxe Gonzalez Garcia <cyenyxe@ebi.ac.uk>
*/
public abstract class VariantSourceEntryJsonMixin {
@JsonIgnore
public abstract String getFileName();
@JsonIgnore
public abstract Set<String> getSampleNames();
@JsonIgnore
public abstract Map<String, Integer> setSamplePositions();
@JsonIgnore
public abstract VariantStats getStats();
@JsonIgnore
public abstract VariantStats getCohortStats(String cohortName);
}