JaxbLoaderTest.java

/*
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 * NICTA t3as SNOMED service common classes
 * %%
 * Copyright (C) 2014 NICTA
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 * This program is free software: you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as
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 * 
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 * GNU General Public License for more details.
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 * You should have received a copy of the GNU General Public
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 * Additional permission under GNU GPL version 3 section 7
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 * If you modify this Program, or any covered work, by linking or combining
 * it with H2, GWT, or JavaBeans Activation Framework (JAF) (or a
 * modified version of those libraries), containing parts covered by the
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package org.t3as.metamap;

import org.t3as.metamap.jaxb.Candidate;
import org.t3as.metamap.jaxb.MMO;
import org.t3as.metamap.jaxb.MMOs;
import org.t3as.metamap.jaxb.Mapping;
import org.t3as.metamap.jaxb.Phrase;
import org.t3as.metamap.jaxb.SemType;
import org.t3as.metamap.jaxb.Utterance;
import org.testng.annotations.Test;

import java.io.File;
import java.io.FileNotFoundException;

import static org.testng.Assert.assertEquals;
import static org.testng.Assert.assertNotNull;
import static org.testng.Assert.fail;

public class JaxbLoaderTest {

    private static final File TEST_XML = new File("src/test/resources/test.xml");

    @SuppressWarnings("OverlyBroadThrowsClause")
    @Test
    public void testLoadXml() throws Exception {
        final MMOs root = JaxbLoader.loadXml(TEST_XML);
        assertNotNull(root);

        final MMO mmo = root.getMMO().get(0);
        assertNotNull(mmo);

        final Utterance utterance = mmo.getUtterances().getUtterance().get(0);
        assertNotNull(utterance);

        final Phrase phrase = utterance.getPhrases().getPhrase().get(0);
        assertNotNull(phrase);

        final Mapping mapping = phrase.getMappings().getMapping().get(0);
        assertNotNull(mapping);

        final Candidate candidate = mapping.getMappingCandidates().getCandidate().get(0);
        assertNotNull(candidate);
        assertEquals(candidate.getCandidateCUI(), "C0004096");
        assertEquals(candidate.getCandidatePreferred(), "Asthma");

        final SemType semType = candidate.getSemTypes().getSemType().get(0);
        assertEquals(semType.getvalue(), "dsyn");
    }

    @Test
    public void failToLoad() {
        //noinspection OverlyBroadCatchBlock
        try {
            JaxbLoader.loadXml(new File("noSuchFile"));
            fail("We should have had an exception before now.");
        }
        catch (final FileNotFoundException ignored) {
            // do nothing
        }
        catch (final Throwable t) {
            //noinspection CallToPrintStackTrace
            t.printStackTrace();
            fail("There should be no other throwables.");
        }
    }
}