/*
Copyright (C) 2009 Diego Darriba
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
*/
package es.uvigo.darwin.xprottest.results;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.CRITERION_NAMES;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.CRITERION_PRECISSION;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.PARAMETER_F;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.PARAMETER_G;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.PARAMETER_I;
import static es.uvigo.darwin.prottest.global.ProtTestConstants.PARAMETER_IG;
import static es.uvigo.darwin.prottest.selection.printer.PrintFramework.getDisplayValue;
import java.util.Collection;
import javax.swing.JTable;
import javax.swing.RowSorter;
import javax.swing.event.ListSelectionEvent;
import javax.swing.event.ListSelectionListener;
import javax.swing.table.TableModel;
import javax.swing.table.TableRowSorter;
import org.jdesktop.application.Action;
import pal.alignment.Alignment;
import es.uvigo.darwin.prottest.facade.util.SelectionChunk;
import es.uvigo.darwin.prottest.model.Model;
import es.uvigo.darwin.prottest.selection.InformationCriterion;
import es.uvigo.darwin.prottest.selection.model.SelectionModel;
import es.uvigo.darwin.prottest.util.printer.ProtTestFormattedOutput;
import es.uvigo.darwin.prottest.util.printer.ProtTestPrinter;
import es.uvigo.darwin.xprottest.XProtTestView;
/**
* The view of the model selection results. It includes a selection under all
* supported information criterions.
*
* @author Diego Darriba
*/
public class ResultsView extends javax.swing.JFrame {
private static final int AIC_TAB = 0;
private static final int BIC_TAB = 1;
private static final int AICC_TAB = 2;
private static final int DT_TAB = 3;
private int rows;
javax.swing.table.DefaultTableModel aicTableModel, bicTableModel,
aiccTableModel, dtTableModel;
private Model[] models;
private Alignment alignment;
private XProtTestView mainFrame;
private SelectionChunk aicResults, bicResults, aiccResults, dtResults;
// private boolean existInvModels = false,
// existGammaModels = false,
// existGammaInvModels = false,
// existFModels = false;
private void loadCache(double confidenceInterval) {
// criterion cache
aicResults = mainFrame.getFacade().computeInformationCriterion(
alignment, models, SelectionChunk.AIC, confidenceInterval);
bicResults = mainFrame.getFacade().computeInformationCriterion(
alignment, models, SelectionChunk.BIC, confidenceInterval);
aiccResults = mainFrame.getFacade().computeInformationCriterion(
alignment, models, SelectionChunk.AICC, confidenceInterval);
dtResults = mainFrame.getFacade().computeInformationCriterion(
alignment, models, SelectionChunk.DT, confidenceInterval);
}
/** Creates new form ResultsView */
public ResultsView(XProtTestView mainFrame, Alignment alignment,
Model[] models, boolean correctDone) {
this.mainFrame = mainFrame;
this.alignment = alignment;
this.rows = models.length;
this.models = models;
// for (Model model : models) {
// if (!existInvModels && model.isInv() && !model.isGamma()) {
// existInvModels = true;
// } else if (!existGammaModels && !model.isInv() && model.isGamma()) {
// existGammaModels = true;
// } else if (!existGammaInvModels && model.isInv() && model.isGamma())
// {
// existGammaInvModels = true;
// } else if (!existFModels && model.isPlusF()) {
// existFModels = true;
// }
// }
initComponents();
loadCache(Double.parseDouble(sliderConfidenceInterval.getValue() + "") / 100);
fillInResults();
lblNotComplete.setVisible(!correctDone);
}
/**
* This method is called from within the constructor to initialize the form.
* WARNING: Do NOT modify this code. The content of this method is always
* regenerated by the Form Editor.
*/
@SuppressWarnings("unchecked")
// <editor-fold defaultstate="collapsed"
// desc="Generated Code">//GEN-BEGIN:initComponents
private void initComponents() {
resultsTabbedPane = new javax.swing.JTabbedPane();
aicPanel = new javax.swing.JPanel();
aicScrollPanel = new javax.swing.JScrollPane();
aicTable = new javax.swing.JTable();
aicDataPanel = new javax.swing.JPanel();
lblAICOverall = new javax.swing.JLabel();
lblAICOverallAlpha = new javax.swing.JLabel();
lblAICOverallAlphaInv = new javax.swing.JLabel();
lblAICOverallInvAlpha = new javax.swing.JLabel();
lblAICOverallInv = new javax.swing.JLabel();
displayAICoAlpha = new javax.swing.JLabel();
displayAICoAlphaInv = new javax.swing.JLabel();
displayAICoInvAlpha = new javax.swing.JLabel();
displayAICoInv = new javax.swing.JLabel();
lblAICPI = new javax.swing.JLabel();
lblAICImpInv = new javax.swing.JLabel();
lblAICImpAlpha = new javax.swing.JLabel();
lblAICImpF = new javax.swing.JLabel();
lblAICImpAlphaInv = new javax.swing.JLabel();
displayAICImpInv = new javax.swing.JLabel();
displayAICImpAlpha = new javax.swing.JLabel();
displayAICImpAlphaInv = new javax.swing.JLabel();
displayAICImpF = new javax.swing.JLabel();
bicPanel = new javax.swing.JPanel();
bicScrollPanel = new javax.swing.JScrollPane();
bicTable = new javax.swing.JTable();
bicDataPanel = new javax.swing.JPanel();
lblBICOverall = new javax.swing.JLabel();
lblBICOverallAlpha = new javax.swing.JLabel();
lblBICOverallAlphaInv = new javax.swing.JLabel();
lblBICOverallInvAlpha = new javax.swing.JLabel();
lblBICOverallInv = new javax.swing.JLabel();
displayBICoAlpha = new javax.swing.JLabel();
displayBICoAlphaInv = new javax.swing.JLabel();
displayBICoInvAlpha = new javax.swing.JLabel();
displayBICoInv = new javax.swing.JLabel();
lblBICImpInv = new javax.swing.JLabel();
lblBICImpAlpha = new javax.swing.JLabel();
lblBICImpF = new javax.swing.JLabel();
lblBICImpAlphaInv = new javax.swing.JLabel();
displayBICImpInv = new javax.swing.JLabel();
displayBICImpAlpha = new javax.swing.JLabel();
displayBICImpAlphaInv = new javax.swing.JLabel();
displayBICImpF = new javax.swing.JLabel();
lblBICPI = new javax.swing.JLabel();
aiccPanel = new javax.swing.JPanel();
aiccScrollPanel = new javax.swing.JScrollPane();
aiccTable = new javax.swing.JTable();
aiccDataPanel = new javax.swing.JPanel();
lblAICcOverall = new javax.swing.JLabel();
lblAICcOverallAlpha = new javax.swing.JLabel();
lblAICcOverallAlphaInv = new javax.swing.JLabel();
lblAICcOverallInvAlpha = new javax.swing.JLabel();
lblAICcOverallInv = new javax.swing.JLabel();
displayAICcoAlpha = new javax.swing.JLabel();
displayAICcoAlphaInv = new javax.swing.JLabel();
displayAICcoInvAlpha = new javax.swing.JLabel();
displayAICcoInv = new javax.swing.JLabel();
lblAICcPI = new javax.swing.JLabel();
lblAICcImpInv = new javax.swing.JLabel();
lblAICcImpAlpha = new javax.swing.JLabel();
lblAICcImpF = new javax.swing.JLabel();
lblAICcImpAlphaInv = new javax.swing.JLabel();
displayAICcImpInv = new javax.swing.JLabel();
displayAICcImpAlpha = new javax.swing.JLabel();
displayAICcImpAlphaInv = new javax.swing.JLabel();
displayAICcImpF = new javax.swing.JLabel();
dtPanel = new javax.swing.JPanel();
dtScrollPanel = new javax.swing.JScrollPane();
dtTable = new javax.swing.JTable();
dtDataPanel = new javax.swing.JPanel();
lblDTOverall = new javax.swing.JLabel();
lblDTOverallAlpha = new javax.swing.JLabel();
lblDTOverallAlphaInv = new javax.swing.JLabel();
lblDTOverallInvAlpha = new javax.swing.JLabel();
lblDTOverallInv = new javax.swing.JLabel();
displayDToAlpha = new javax.swing.JLabel();
displayDToAlphaInv = new javax.swing.JLabel();
displayDToInvAlpha = new javax.swing.JLabel();
displayDToInv = new javax.swing.JLabel();
lblDTPI = new javax.swing.JLabel();
lblDTImpInv = new javax.swing.JLabel();
lblDTImpAlpha = new javax.swing.JLabel();
lblDTImpF = new javax.swing.JLabel();
lblDTImpAlphaInv = new javax.swing.JLabel();
displayDTImpInv = new javax.swing.JLabel();
displayDTImpAlpha = new javax.swing.JLabel();
displayDTImpAlphaInv = new javax.swing.JLabel();
displayDTImpF = new javax.swing.JLabel();
sliderConfidenceInterval = new javax.swing.JSlider();
lblConfInt = new javax.swing.JLabel();
jScrollPane1 = new javax.swing.JScrollPane();
lblCommandLine = new javax.swing.JTextArea();
lblComandLineLabel = new javax.swing.JLabel();
lblSelectedModelLabel = new javax.swing.JLabel();
lblSelectedModel = new javax.swing.JLabel();
lblNotComplete = new javax.swing.JLabel();
lblConfidence = new javax.swing.JLabel();
btnExport = new javax.swing.JButton();
setDefaultCloseOperation(javax.swing.WindowConstants.DISPOSE_ON_CLOSE);
org.jdesktop.application.ResourceMap resourceMap = org.jdesktop.application.Application
.getInstance().getContext().getResourceMap(ResultsView.class);
setTitle(resourceMap.getString("Form.title")); // NOI18N
setName("Form"); // NOI18N
setResizable(false);
resultsTabbedPane
.setTabLayoutPolicy(javax.swing.JTabbedPane.SCROLL_TAB_LAYOUT);
resultsTabbedPane.setName("resultsTabbedPane"); // NOI18N
aicPanel.setName("aicPanel"); // NOI18N
aicScrollPanel.setName("aicScrollPanel"); // NOI18N
aicTableModel = new javax.swing.table.DefaultTableModel() {
public Class getColumnClass(int column) {
if (column == 0)
return String.class;
if (column >= 1 && column <= getColumnCount()) {
try {
return getValueAt(0, column).getClass();
} catch (ArrayIndexOutOfBoundsException e) {
return Object.class;
}
} else
return Object.class;
}
public boolean isCellEditable(int row, int col) {
return false;
}
};
aicTableModel.addColumn("Model", new String[rows][1]);
aicTableModel.addColumn("-LnL", new Double[rows][1]);
aicTableModel.addColumn("AIC", new Double[rows][1]);
aicTableModel.addColumn("deltaAIC", new Double[rows][1]);
aicTableModel.addColumn("AIC weight", new Double[rows][1]);
aicTable.setModel(aicTableModel);
aicTable.setCellSelectionEnabled(true);
aicTable.setName("aicTable"); // NOI18N
RowSorter<TableModel> aicSorter = new TableRowSorter<TableModel>(
aicTableModel);
aicTable.setRowSorter(aicSorter);
SelectionListener listener = new SelectionListener(aicTable);
aicTable.getSelectionModel().addListSelectionListener(listener);
aicTable.getColumnModel().getSelectionModel()
.addListSelectionListener(listener);
aicScrollPanel.setViewportView(aicTable);
aicDataPanel.setBorder(javax.swing.BorderFactory
.createLineBorder(new java.awt.Color(0, 0, 0)));
aicDataPanel.setName("aicDataPanel"); // NOI18N
java.util.ResourceBundle bundle = java.util.ResourceBundle
.getBundle("es/uvigo/darwin/xprottest/results/resources/ResultsView"); // NOI18N
lblAICOverall.setText(bundle.getString("lbl-overall")); // NOI18N
lblAICOverall.setName("lblAICOverall"); // NOI18N
lblAICOverallAlpha.setText(bundle.getString("lbl-overall-alpha")); // NOI18N
lblAICOverallAlpha.setName("lblAICOverallAlpha"); // NOI18N
lblAICOverallAlphaInv
.setText(bundle.getString("lbl-overall-alpha-inv")); // NOI18N
lblAICOverallAlphaInv.setName("lblAICOverallAlphaInv"); // NOI18N
lblAICOverallInvAlpha
.setText(bundle.getString("lbl-overall-inv-alpha")); // NOI18N
lblAICOverallInvAlpha.setName("lblAICOverallInvAlpha"); // NOI18N
lblAICOverallInv.setText(bundle.getString("lbl-overall-inv")); // NOI18N
lblAICOverallInv.setName("lblAICOverallInv"); // NOI18N
displayAICoAlpha
.setText(resourceMap.getString("displayAICoAlpha.text")); // NOI18N
displayAICoAlpha.setName("displayAICoAlpha"); // NOI18N
displayAICoAlphaInv.setText(resourceMap
.getString("displayAICoAlphaInv.text")); // NOI18N
displayAICoAlphaInv.setName("displayAICoAlphaInv"); // NOI18N
displayAICoInvAlpha.setText(resourceMap
.getString("displayAICoInvAlpha.text")); // NOI18N
displayAICoInvAlpha.setName("displayAICoInvAlpha"); // NOI18N
displayAICoInv.setText(resourceMap.getString("displayAICoInv.text")); // NOI18N
displayAICoInv.setName("displayAICoInv"); // NOI18N
lblAICPI.setText(resourceMap.getString("lblAICPI.text")); // NOI18N
lblAICPI.setName("lblAICPI"); // NOI18N
lblAICImpInv.setText(resourceMap.getString("lblAICImpInv.text")); // NOI18N
lblAICImpInv.setName("lblAICImpInv"); // NOI18N
lblAICImpAlpha.setText(resourceMap.getString("lblAICImpAlpha.text")); // NOI18N
lblAICImpAlpha.setName("lblAICImpAlpha"); // NOI18N
lblAICImpF.setText(resourceMap.getString("lblAICImpF.text")); // NOI18N
lblAICImpF.setName("lblAICImpF"); // NOI18N
lblAICImpAlphaInv.setText(resourceMap
.getString("lblAICImpAlphaInv.text")); // NOI18N
lblAICImpAlphaInv.setName("lblAICImpAlphaInv"); // NOI18N
displayAICImpInv
.setText(resourceMap.getString("displayAICImpInv.text")); // NOI18N
displayAICImpInv.setName("displayAICImpInv"); // NOI18N
displayAICImpAlpha.setText(resourceMap
.getString("displayAICImpAlpha.text")); // NOI18N
displayAICImpAlpha.setName("displayAICImpAlpha"); // NOI18N
displayAICImpAlphaInv.setText(resourceMap
.getString("displayAICImpAlphaInv.text")); // NOI18N
displayAICImpAlphaInv.setName("displayAICImpAlphaInv"); // NOI18N
displayAICImpF.setText(resourceMap.getString("displayAICImpF.text")); // NOI18N
displayAICImpF.setName("displayAICImpF"); // NOI18N
javax.swing.GroupLayout aicDataPanelLayout = new javax.swing.GroupLayout(
aicDataPanel);
aicDataPanel.setLayout(aicDataPanelLayout);
aicDataPanelLayout
.setHorizontalGroup(aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addGap(44,
44,
44)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
lblAICOverallAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICOverallAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICOverallInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICOverallInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addGap(18,
18,
18)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
displayAICoInv)
.addComponent(
displayAICoInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayAICoAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayAICoAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE))
.addGap(40,
40,
40))
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
lblAICOverall,
javax.swing.GroupLayout.DEFAULT_SIZE,
366,
Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)))
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
false)
.addComponent(
lblAICImpAlpha,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICImpInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICImpF,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICImpAlphaInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.PREFERRED_SIZE,
59,
javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
displayAICImpInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
83,
Short.MAX_VALUE)
.addComponent(
displayAICImpAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayAICImpAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayAICImpF,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)))
.addComponent(
lblAICPI,
javax.swing.GroupLayout.DEFAULT_SIZE,
237,
Short.MAX_VALUE))
.addContainerGap()));
aicDataPanelLayout
.setVerticalGroup(aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICOverall)
.addComponent(lblAICPI))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICOverallAlpha)
.addComponent(
displayAICoAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICOverallAlphaInv)
.addComponent(
displayAICoAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICOverallInvAlpha)
.addComponent(
displayAICoInvAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICOverallInv)
.addComponent(
displayAICoInv)))
.addGroup(
aicDataPanelLayout
.createSequentialGroup()
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICImpInv)
.addComponent(
displayAICImpInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICImpAlpha)
.addComponent(
displayAICImpAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICImpAlphaInv)
.addComponent(
displayAICImpAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICImpF)
.addComponent(
displayAICImpF))))
.addContainerGap(
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)));
javax.swing.GroupLayout aicPanelLayout = new javax.swing.GroupLayout(
aicPanel);
aicPanel.setLayout(aicPanelLayout);
aicPanelLayout
.setHorizontalGroup(aicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aicPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
aicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
aicScrollPanel,
javax.swing.GroupLayout.Alignment.TRAILING,
javax.swing.GroupLayout.DEFAULT_SIZE,
635,
Short.MAX_VALUE)
.addComponent(
aicDataPanel,
javax.swing.GroupLayout.Alignment.TRAILING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addContainerGap()));
aicPanelLayout
.setVerticalGroup(aicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
aicPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
aicScrollPanel,
javax.swing.GroupLayout.DEFAULT_SIZE,
300, Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
aicDataPanel,
javax.swing.GroupLayout.PREFERRED_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.PREFERRED_SIZE)
.addContainerGap()));
resultsTabbedPane.addTab(
resourceMap.getString("aicPanel.TabConstraints.tabTitle"),
aicPanel); // NOI18N
bicPanel.setName("bicPanel"); // NOI18N
bicScrollPanel.setName("bicScrollPanel"); // NOI18N
bicTableModel = new javax.swing.table.DefaultTableModel() {
public Class getColumnClass(int column) {
if (column >= 0 && column <= getColumnCount()) {
try {
return getValueAt(0, column).getClass();
} catch (ArrayIndexOutOfBoundsException e) {
return Object.class;
}
} else
return Object.class;
}
public boolean isCellEditable(int row, int col) {
return false;
}
};
bicTableModel.addColumn("Model", new String[rows][1]);
bicTableModel.addColumn("-LnL", new Double[rows][1]);
bicTableModel.addColumn("BIC", new Double[rows][1]);
bicTableModel.addColumn("deltaBIC", new Double[rows][1]);
bicTableModel.addColumn("BIC weight", new Double[rows][1]);
bicTable.setModel(bicTableModel);
bicTable.setCellSelectionEnabled(true);
bicTable.setName("bicTable"); // NOI18N
RowSorter<TableModel> bicSorter = new TableRowSorter<TableModel>(
bicTableModel);
bicTable.setRowSorter(bicSorter);
SelectionListener bicListener = new SelectionListener(bicTable);
bicTable.getSelectionModel().addListSelectionListener(bicListener);
bicTable.getColumnModel().getSelectionModel()
.addListSelectionListener(bicListener);
bicScrollPanel.setViewportView(bicTable);
bicDataPanel.setBorder(javax.swing.BorderFactory
.createLineBorder(new java.awt.Color(0, 0, 0)));
bicDataPanel.setName("bicDataPanel"); // NOI18N
java.util.ResourceBundle bundle1 = java.util.ResourceBundle
.getBundle("es/uvigo/darwin/xprottest/results/Bundle"); // NOI18N
lblBICOverall.setText(bundle1.getString("lbl-overall")); // NOI18N
lblBICOverall.setName("lblBICOverall"); // NOI18N
lblBICOverallAlpha.setText(bundle1.getString("lbl-overall-alpha")); // NOI18N
lblBICOverallAlpha.setName("lblBICOverallAlpha"); // NOI18N
lblBICOverallAlphaInv.setText(bundle1
.getString("lbl-overall-alpha-inv")); // NOI18N
lblBICOverallAlphaInv.setName("lblBICOverallAlphaInv"); // NOI18N
lblBICOverallInvAlpha.setText(bundle1
.getString("lbl-overall-inv-alpha")); // NOI18N
lblBICOverallInvAlpha.setName("lblBICOverallInvAlpha"); // NOI18N
lblBICOverallInv.setText(bundle1.getString("lbl-overall-inv")); // NOI18N
lblBICOverallInv.setName("lblBICOverallInv"); // NOI18N
displayBICoAlpha
.setText(resourceMap.getString("displayBICoAlpha.text")); // NOI18N
displayBICoAlpha.setName("displayBICoAlpha"); // NOI18N
displayBICoAlphaInv.setText(resourceMap
.getString("displayBICoAlphaInv.text")); // NOI18N
displayBICoAlphaInv.setName("displayBICoAlphaInv"); // NOI18N
displayBICoInvAlpha.setText(resourceMap
.getString("displayBICoInvAlpha.text")); // NOI18N
displayBICoInvAlpha.setName("displayBICoInvAlpha"); // NOI18N
displayBICoInv.setText(resourceMap.getString("displayBICoInv.text")); // NOI18N
displayBICoInv.setName("displayBICoInv"); // NOI18N
lblBICImpInv.setText(resourceMap.getString("lblBICImpInv.text")); // NOI18N
lblBICImpInv.setName("lblBICImpInv"); // NOI18N
lblBICImpAlpha.setText(resourceMap.getString("lblBICImpAlpha.text")); // NOI18N
lblBICImpAlpha.setName("lblBICImpAlpha"); // NOI18N
lblBICImpF.setText(resourceMap.getString("lblBICImpF.text")); // NOI18N
lblBICImpF.setName("lblBICImpF"); // NOI18N
lblBICImpAlphaInv.setText(resourceMap
.getString("lblBICImpAlphaInv.text")); // NOI18N
lblBICImpAlphaInv.setName("lblBICImpAlphaInv"); // NOI18N
displayBICImpInv
.setText(resourceMap.getString("displayBICImpInv.text")); // NOI18N
displayBICImpInv.setName("displayBICImpInv"); // NOI18N
displayBICImpAlpha.setText(resourceMap
.getString("displayBICImpAlpha.text")); // NOI18N
displayBICImpAlpha.setName("displayBICImpAlpha"); // NOI18N
displayBICImpAlphaInv.setText(resourceMap
.getString("displayBICImpAlphaInv.text")); // NOI18N
displayBICImpAlphaInv.setName("displayBICImpAlphaInv"); // NOI18N
displayBICImpF.setText(resourceMap.getString("displayBICImpF.text")); // NOI18N
displayBICImpF.setName("displayBICImpF"); // NOI18N
lblBICPI.setText(resourceMap.getString("lblBICPI.text")); // NOI18N
lblBICPI.setName("lblBICPI"); // NOI18N
javax.swing.GroupLayout bicDataPanelLayout = new javax.swing.GroupLayout(
bicDataPanel);
bicDataPanel.setLayout(bicDataPanelLayout);
bicDataPanelLayout
.setHorizontalGroup(bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addGap(44,
44,
44)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
lblBICOverallAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICOverallAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICOverallInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICOverallInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addGap(18,
18,
18)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
displayBICoInv)
.addComponent(
displayBICoInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayBICoAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayBICoAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE))
.addGap(40,
40,
40))
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
lblBICOverall,
javax.swing.GroupLayout.DEFAULT_SIZE,
366,
Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)))
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING)
.addGroup(
javax.swing.GroupLayout.Alignment.LEADING,
bicDataPanelLayout
.createSequentialGroup()
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
false)
.addComponent(
lblBICImpAlpha,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICImpInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICImpF,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblBICImpAlphaInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.PREFERRED_SIZE,
59,
javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
displayBICImpInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
83,
Short.MAX_VALUE)
.addComponent(
displayBICImpAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayBICImpAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayBICImpF,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)))
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
lblBICPI,
javax.swing.GroupLayout.DEFAULT_SIZE,
237,
Short.MAX_VALUE)))
.addContainerGap()));
bicDataPanelLayout
.setVerticalGroup(bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICOverall)
.addComponent(lblBICPI))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICOverallAlpha)
.addComponent(
displayBICoAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICOverallAlphaInv)
.addComponent(
displayBICoAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICOverallInvAlpha)
.addComponent(
displayBICoInvAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICOverallInv)
.addComponent(
displayBICoInv)))
.addGroup(
bicDataPanelLayout
.createSequentialGroup()
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICImpInv)
.addComponent(
displayBICImpInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICImpAlpha)
.addComponent(
displayBICImpAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICImpAlphaInv)
.addComponent(
displayBICImpAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
bicDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblBICImpF)
.addComponent(
displayBICImpF))))
.addContainerGap(
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)));
javax.swing.GroupLayout bicPanelLayout = new javax.swing.GroupLayout(
bicPanel);
bicPanel.setLayout(bicPanelLayout);
bicPanelLayout
.setHorizontalGroup(bicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
bicPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
bicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
bicScrollPanel,
javax.swing.GroupLayout.Alignment.TRAILING,
javax.swing.GroupLayout.DEFAULT_SIZE,
635,
Short.MAX_VALUE)
.addComponent(
bicDataPanel,
javax.swing.GroupLayout.Alignment.TRAILING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addContainerGap()));
bicPanelLayout
.setVerticalGroup(bicPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
bicPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
bicScrollPanel,
javax.swing.GroupLayout.DEFAULT_SIZE,
300, Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
bicDataPanel,
javax.swing.GroupLayout.PREFERRED_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.PREFERRED_SIZE)
.addContainerGap()));
resultsTabbedPane.addTab(
resourceMap.getString("bicPanel.TabConstraints.tabTitle"),
bicPanel); // NOI18N
aiccPanel.setName("aiccPanel"); // NOI18N
aiccScrollPanel.setName("aiccScrollPanel"); // NOI18N
aiccTableModel = new javax.swing.table.DefaultTableModel() {
public Class getColumnClass(int column) {
if (column >= 0 && column <= getColumnCount()) {
try {
return getValueAt(0, column).getClass();
} catch (ArrayIndexOutOfBoundsException e) {
return Object.class;
}
} else
return Object.class;
}
public boolean isCellEditable(int row, int col) {
return false;
}
};
aiccTableModel.addColumn("Model", new String[rows][1]);
aiccTableModel.addColumn("-LnL", new Double[rows][1]);
aiccTableModel.addColumn("AICc", new Double[rows][1]);
aiccTableModel.addColumn("deltaAICc", new Double[rows][1]);
aiccTableModel.addColumn("AICc weight", new Double[rows][1]);
aiccTable.setModel(aiccTableModel);
aiccTable.setCellSelectionEnabled(true);
aiccTable.setName("aiccTable"); // NOI18N
RowSorter<TableModel> aiccSorter = new TableRowSorter<TableModel>(
aiccTableModel);
aiccTable.setRowSorter(aiccSorter);
SelectionListener aiccListener = new SelectionListener(aiccTable);
aiccTable.getSelectionModel().addListSelectionListener(aiccListener);
aiccTable.getColumnModel().getSelectionModel()
.addListSelectionListener(aiccListener);
aiccScrollPanel.setViewportView(aiccTable);
aiccDataPanel.setBorder(javax.swing.BorderFactory
.createLineBorder(new java.awt.Color(0, 0, 0)));
aiccDataPanel.setName("aiccDataPanel"); // NOI18N
lblAICcOverall.setText(bundle1.getString("lbl-overall_1")); // NOI18N
lblAICcOverall.setName("lblAICcOverall"); // NOI18N
lblAICcOverallAlpha.setText(bundle1.getString("lbl-overall-alpha_1")); // NOI18N
lblAICcOverallAlpha.setName("lblAICcOverallAlpha"); // NOI18N
lblAICcOverallAlphaInv.setText(bundle1
.getString("lbl-overall-alpha-inv_1")); // NOI18N
lblAICcOverallAlphaInv.setName("lblAICcOverallAlphaInv"); // NOI18N
lblAICcOverallInvAlpha.setText(bundle1
.getString("lbl-overall-inv-alpha_1")); // NOI18N
lblAICcOverallInvAlpha.setName("lblAICcOverallInvAlpha"); // NOI18N
lblAICcOverallInv.setText(bundle1.getString("lbl-overall-inv_1")); // NOI18N
lblAICcOverallInv.setName("lblAICcOverallInv"); // NOI18N
displayAICcoAlpha.setText(resourceMap
.getString("displayAICcoAlpha.text")); // NOI18N
displayAICcoAlpha.setName("displayAICcoAlpha"); // NOI18N
displayAICcoAlphaInv.setText(resourceMap
.getString("displayAICcoAlphaInv.text")); // NOI18N
displayAICcoAlphaInv.setName("displayAICcoAlphaInv"); // NOI18N
displayAICcoInvAlpha.setText(resourceMap
.getString("displayAICcoInvAlpha.text")); // NOI18N
displayAICcoInvAlpha.setName("displayAICcoInvAlpha"); // NOI18N
displayAICcoInv.setText(resourceMap.getString("displayAICcoInv.text")); // NOI18N
displayAICcoInv.setName("displayAICcoInv"); // NOI18N
lblAICcPI.setText(resourceMap.getString("lblAICcPI.text")); // NOI18N
lblAICcPI.setName("lblAICcPI"); // NOI18N
lblAICcImpInv.setText(resourceMap.getString("lblAICcImpInv.text")); // NOI18N
lblAICcImpInv.setName("lblAICcImpInv"); // NOI18N
lblAICcImpAlpha.setText(resourceMap.getString("lblAICcImpAlpha.text")); // NOI18N
lblAICcImpAlpha.setName("lblAICcImpAlpha"); // NOI18N
lblAICcImpF.setText(resourceMap.getString("lblAICcImpF.text")); // NOI18N
lblAICcImpF.setName("lblAICcImpF"); // NOI18N
lblAICcImpAlphaInv.setText(resourceMap
.getString("lblAICcImpAlphaInv.text")); // NOI18N
lblAICcImpAlphaInv.setName("lblAICcImpAlphaInv"); // NOI18N
displayAICcImpInv.setText(resourceMap
.getString("displayAICcImpInv.text")); // NOI18N
displayAICcImpInv.setName("displayAICcImpInv"); // NOI18N
displayAICcImpAlpha.setText(resourceMap
.getString("displayAICcImpAlpha.text")); // NOI18N
displayAICcImpAlpha.setName("displayAICcImpAlpha"); // NOI18N
displayAICcImpAlphaInv.setText(resourceMap
.getString("displayAICcImpAlphaInv.text")); // NOI18N
displayAICcImpAlphaInv.setName("displayAICcImpAlphaInv"); // NOI18N
displayAICcImpF.setText(resourceMap.getString("displayAICcImpF.text")); // NOI18N
displayAICcImpF.setName("displayAICcImpF"); // NOI18N
javax.swing.GroupLayout aiccDataPanelLayout = new javax.swing.GroupLayout(
aiccDataPanel);
aiccDataPanel.setLayout(aiccDataPanelLayout);
aiccDataPanelLayout
.setHorizontalGroup(aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addGap(44,
44,
44)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
lblAICcOverallAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcOverallAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcOverallInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcOverallInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addGap(18,
18,
18)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
displayAICcoInv)
.addComponent(
displayAICcoInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayAICcoAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayAICcoAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE))
.addGap(40,
40,
40))
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
lblAICcOverall,
javax.swing.GroupLayout.DEFAULT_SIZE,
366,
Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)))
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
false)
.addComponent(
lblAICcImpAlpha,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcImpInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcImpF,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblAICcImpAlphaInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.PREFERRED_SIZE,
59,
javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
displayAICcImpInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
83,
Short.MAX_VALUE)
.addComponent(
displayAICcImpAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayAICcImpAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayAICcImpF,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)))
.addComponent(
lblAICcPI,
javax.swing.GroupLayout.DEFAULT_SIZE,
237,
Short.MAX_VALUE))
.addContainerGap()));
aiccDataPanelLayout
.setVerticalGroup(aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcOverall)
.addComponent(lblAICcPI))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcOverallAlpha)
.addComponent(
displayAICcoAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcOverallAlphaInv)
.addComponent(
displayAICcoAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcOverallInvAlpha)
.addComponent(
displayAICcoInvAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcOverallInv)
.addComponent(
displayAICcoInv)))
.addGroup(
aiccDataPanelLayout
.createSequentialGroup()
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcImpInv)
.addComponent(
displayAICcImpInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcImpAlpha)
.addComponent(
displayAICcImpAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcImpAlphaInv)
.addComponent(
displayAICcImpAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
aiccDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblAICcImpF)
.addComponent(
displayAICcImpF))))
.addContainerGap(
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)));
javax.swing.GroupLayout aiccPanelLayout = new javax.swing.GroupLayout(
aiccPanel);
aiccPanel.setLayout(aiccPanelLayout);
aiccPanelLayout
.setHorizontalGroup(aiccPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
aiccPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
aiccPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING)
.addComponent(
aiccScrollPanel,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
635,
Short.MAX_VALUE)
.addComponent(
aiccDataPanel,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addContainerGap()));
aiccPanelLayout
.setVerticalGroup(aiccPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
aiccPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
aiccScrollPanel,
javax.swing.GroupLayout.DEFAULT_SIZE,
300, Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
aiccDataPanel,
javax.swing.GroupLayout.PREFERRED_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.PREFERRED_SIZE)
.addContainerGap()));
resultsTabbedPane.addTab(
resourceMap.getString("aiccPanel.TabConstraints.tabTitle"),
aiccPanel); // NOI18N
dtPanel.setName("dtPanel"); // NOI18N
dtScrollPanel.setName("dtScrollPanel"); // NOI18N
dtTableModel = new javax.swing.table.DefaultTableModel() {
public Class getColumnClass(int column) {
if (column >= 0 && column <= getColumnCount()) {
try {
return getValueAt(0, column).getClass();
} catch (ArrayIndexOutOfBoundsException e) {
return Object.class;
}
} else
return Object.class;
}
public boolean isCellEditable(int row, int col) {
return false;
}
};
dtTableModel.addColumn("Model", new String[rows][1]);
dtTableModel.addColumn("-LnL", new Double[rows][1]);
dtTableModel.addColumn("DT", new Double[rows][1]);
dtTableModel.addColumn("deltaDT", new Double[rows][1]);
dtTableModel.addColumn("DT weight", new Double[rows][1]);
dtTable.setModel(dtTableModel);
dtTable.setCellSelectionEnabled(true);
dtTable.setName("dtTable"); // NOI18N
RowSorter<TableModel> dtSorter = new TableRowSorter<TableModel>(
dtTableModel);
dtTable.setRowSorter(dtSorter);
SelectionListener dtListener = new SelectionListener(dtTable);
dtTable.getSelectionModel().addListSelectionListener(dtListener);
dtTable.getColumnModel().getSelectionModel()
.addListSelectionListener(dtListener);
dtScrollPanel.setViewportView(dtTable);
dtDataPanel.setBorder(javax.swing.BorderFactory
.createLineBorder(new java.awt.Color(0, 0, 0)));
dtDataPanel.setName("dtDataPanel"); // NOI18N
lblDTOverall.setText(bundle1.getString("lbl-overall_2")); // NOI18N
lblDTOverall.setName("lblDTOverall"); // NOI18N
lblDTOverallAlpha.setText(bundle1.getString("lbl-overall-alpha_2")); // NOI18N
lblDTOverallAlpha.setName("lblDTOverallAlpha"); // NOI18N
lblDTOverallAlphaInv.setText(bundle1
.getString("lbl-overall-alpha-inv_2")); // NOI18N
lblDTOverallAlphaInv.setName("lblDTOverallAlphaInv"); // NOI18N
lblDTOverallInvAlpha.setText(bundle1
.getString("lbl-overall-inv-alpha_2")); // NOI18N
lblDTOverallInvAlpha.setName("lblDTOverallInvAlpha"); // NOI18N
lblDTOverallInv.setText(bundle1.getString("lbl-overall-inv_2")); // NOI18N
lblDTOverallInv.setName("lblDTOverallInv"); // NOI18N
displayDToAlpha.setText(resourceMap.getString("displayDToAlpha.text")); // NOI18N
displayDToAlpha.setName("displayDToAlpha"); // NOI18N
displayDToAlphaInv.setText(resourceMap
.getString("displayDToAlphaInv.text")); // NOI18N
displayDToAlphaInv.setName("displayDToAlphaInv"); // NOI18N
displayDToInvAlpha.setText(resourceMap
.getString("displayDToInvAlpha.text")); // NOI18N
displayDToInvAlpha.setName("displayDToInvAlpha"); // NOI18N
displayDToInv.setText(resourceMap.getString("displayDToInv.text")); // NOI18N
displayDToInv.setName("displayDToInv"); // NOI18N
lblDTPI.setText(resourceMap.getString("lblDTPI.text")); // NOI18N
lblDTPI.setName("lblDTPI"); // NOI18N
lblDTImpInv.setText(resourceMap.getString("lblDTImpInv.text")); // NOI18N
lblDTImpInv.setName("lblDTImpInv"); // NOI18N
lblDTImpAlpha.setText(resourceMap.getString("lblDTImpAlpha.text")); // NOI18N
lblDTImpAlpha.setName("lblDTImpAlpha"); // NOI18N
lblDTImpF.setText(resourceMap.getString("lblDTImpF.text")); // NOI18N
lblDTImpF.setName("lblDTImpF"); // NOI18N
lblDTImpAlphaInv
.setText(resourceMap.getString("lblDTImpAlphaInv.text")); // NOI18N
lblDTImpAlphaInv.setName("lblDTImpAlphaInv"); // NOI18N
displayDTImpInv.setText(resourceMap.getString("displayDTImpInv.text")); // NOI18N
displayDTImpInv.setName("displayDTImpInv"); // NOI18N
displayDTImpAlpha.setText(resourceMap
.getString("displayDTImpAlpha.text")); // NOI18N
displayDTImpAlpha.setName("displayDTImpAlpha"); // NOI18N
displayDTImpAlphaInv.setText(resourceMap
.getString("displayDTImpAlphaInv.text")); // NOI18N
displayDTImpAlphaInv.setName("displayDTImpAlphaInv"); // NOI18N
displayDTImpF.setText(resourceMap.getString("displayDTImpF.text")); // NOI18N
displayDTImpF.setName("displayDTImpF"); // NOI18N
javax.swing.GroupLayout dtDataPanelLayout = new javax.swing.GroupLayout(
dtDataPanel);
dtDataPanel.setLayout(dtDataPanelLayout);
dtDataPanelLayout
.setHorizontalGroup(dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addGap(44,
44,
44)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
lblDTOverallAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTOverallAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTOverallInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTOverallInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addGap(18,
18,
18)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
displayDToInv)
.addComponent(
displayDToInvAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayDToAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE)
.addComponent(
displayDToAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
223,
Short.MAX_VALUE))
.addGap(40,
40,
40))
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
lblDTOverall,
javax.swing.GroupLayout.DEFAULT_SIZE,
366,
Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)))
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
false)
.addComponent(
lblDTImpAlpha,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTImpInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTImpF,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
lblDTImpAlphaInv,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.PREFERRED_SIZE,
59,
javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING,
false)
.addComponent(
displayDTImpInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
83,
Short.MAX_VALUE)
.addComponent(
displayDTImpAlpha,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayDTImpAlphaInv,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)
.addComponent(
displayDTImpF,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)))
.addComponent(
lblDTPI,
javax.swing.GroupLayout.DEFAULT_SIZE,
237,
Short.MAX_VALUE))
.addContainerGap()));
dtDataPanelLayout
.setVerticalGroup(dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTOverall)
.addComponent(lblDTPI))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTOverallAlpha)
.addComponent(
displayDToAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTOverallAlphaInv)
.addComponent(
displayDToAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTOverallInvAlpha)
.addComponent(
displayDToInvAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTOverallInv)
.addComponent(
displayDToInv)))
.addGroup(
dtDataPanelLayout
.createSequentialGroup()
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTImpInv)
.addComponent(
displayDTImpInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTImpAlpha)
.addComponent(
displayDTImpAlpha))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTImpAlphaInv)
.addComponent(
displayDTImpAlphaInv))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
dtDataPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblDTImpF)
.addComponent(
displayDTImpF))))
.addContainerGap(
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE)));
javax.swing.GroupLayout dtPanelLayout = new javax.swing.GroupLayout(
dtPanel);
dtPanel.setLayout(dtPanelLayout);
dtPanelLayout
.setHorizontalGroup(dtPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
dtPanelLayout
.createSequentialGroup()
.addContainerGap()
.addGroup(
dtPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING)
.addComponent(
dtScrollPanel,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
635,
Short.MAX_VALUE)
.addComponent(
dtDataPanel,
javax.swing.GroupLayout.Alignment.LEADING,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
Short.MAX_VALUE))
.addContainerGap()));
dtPanelLayout
.setVerticalGroup(dtPanelLayout
.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
javax.swing.GroupLayout.Alignment.TRAILING,
dtPanelLayout
.createSequentialGroup()
.addContainerGap()
.addComponent(
dtScrollPanel,
javax.swing.GroupLayout.DEFAULT_SIZE,
300, Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
dtDataPanel,
javax.swing.GroupLayout.PREFERRED_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.PREFERRED_SIZE)
.addContainerGap()));
resultsTabbedPane.addTab(
resourceMap.getString("dtPanel.TabConstraints.tabTitle"),
dtPanel); // NOI18N
javax.swing.ActionMap actionMap = org.jdesktop.application.Application
.getInstance().getContext()
.getActionMap(ResultsView.class, this);
sliderConfidenceInterval.setValue(100);
sliderConfidenceInterval.setMinimum(1);
sliderConfidenceInterval.setName("sliderConfidenceInterval"); // NOI18N
sliderConfidenceInterval
.addMouseListener(new java.awt.event.MouseAdapter() {
public void mouseReleased(java.awt.event.MouseEvent evt) {
sliderConfidenceIntervalMouseReleased(evt);
}
});
sliderConfidenceInterval
.addChangeListener(new javax.swing.event.ChangeListener() {
public void stateChanged(javax.swing.event.ChangeEvent evt) {
sliderConfidenceIntervalStateChanged(evt);
}
});
lblConfInt.setText(resourceMap.getString("lblConfInt.text")); // NOI18N
lblConfInt.setName("lblConfInt"); // NOI18N
jScrollPane1.setName("jScrollPane1"); // NOI18N
lblCommandLine.setBackground(resourceMap
.getColor("lblCommandLine.background")); // NOI18N
lblCommandLine.setColumns(20);
lblCommandLine.setEditable(false);
lblCommandLine.setRows(1);
lblCommandLine.setBorder(null);
lblCommandLine.setName("lblCommandLine"); // NOI18N
jScrollPane1.setViewportView(lblCommandLine);
lblComandLineLabel.setText(resourceMap
.getString("lblComandLineLabel.text")); // NOI18N
lblComandLineLabel.setName("lblComandLineLabel"); // NOI18N
lblSelectedModelLabel.setText(resourceMap
.getString("lblSelectedModelLabel.text")); // NOI18N
lblSelectedModelLabel.setName("lblSelectedModelLabel"); // NOI18N
lblSelectedModel
.setText(resourceMap.getString("lblSelectedModel.text")); // NOI18N
lblSelectedModel.setName("lblSelectedModel"); // NOI18N
lblNotComplete.setBackground(resourceMap
.getColor("lblNotComplete.background")); // NOI18N
lblNotComplete.setFont(resourceMap.getFont("lblNotComplete.font")); // NOI18N
lblNotComplete.setForeground(resourceMap
.getColor("lblNotComplete.foreground")); // NOI18N
lblNotComplete
.setHorizontalAlignment(javax.swing.SwingConstants.CENTER);
java.util.ResourceBundle bundle2 = java.util.ResourceBundle
.getBundle("es/uvigo/darwin/xprottest/resources/XProtTestView"); // NOI18N
lblNotComplete.setText(bundle2.getString("models-not-complete")); // NOI18N
lblNotComplete.setName("lblNotComplete"); // NOI18N
lblNotComplete.setOpaque(true);
lblConfidence.setHorizontalAlignment(javax.swing.SwingConstants.RIGHT);
lblConfidence.setText(resourceMap.getString("lblConfidence.text")); // NOI18N
lblConfidence.setName("lblConfidence"); // NOI18N
btnExport.setAction(actionMap.get("exportData")); // NOI18N
btnExport.setName("btnExport"); // NOI18N
javax.swing.GroupLayout layout = new javax.swing.GroupLayout(
getContentPane());
getContentPane().setLayout(layout);
layout.setHorizontalGroup(layout
.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
layout.createSequentialGroup()
.addContainerGap()
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
resultsTabbedPane,
javax.swing.GroupLayout.DEFAULT_SIZE,
671, Short.MAX_VALUE)
.addGroup(
layout.createSequentialGroup()
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
lblConfInt))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.TRAILING)
.addGroup(
javax.swing.GroupLayout.Alignment.LEADING,
layout.createSequentialGroup()
.addComponent(
lblConfidence,
javax.swing.GroupLayout.PREFERRED_SIZE,
32,
javax.swing.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
sliderConfidenceInterval,
javax.swing.GroupLayout.DEFAULT_SIZE,
489,
Short.MAX_VALUE))))
.addComponent(
lblNotComplete,
javax.swing.GroupLayout.Alignment.TRAILING,
javax.swing.GroupLayout.DEFAULT_SIZE,
671, Short.MAX_VALUE)
.addGroup(
layout.createSequentialGroup()
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addComponent(
lblComandLineLabel)
.addComponent(
lblSelectedModelLabel))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
layout.createSequentialGroup()
.addComponent(
lblSelectedModel,
javax.swing.GroupLayout.DEFAULT_SIZE,
386,
Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
btnExport))
.addComponent(
jScrollPane1,
javax.swing.GroupLayout.DEFAULT_SIZE,
557,
Short.MAX_VALUE))))
.addContainerGap()));
layout.setVerticalGroup(layout
.createParallelGroup(javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
layout.createSequentialGroup()
.addContainerGap()
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.UNRELATED)
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblConfInt)
.addComponent(
lblConfidence))
.addComponent(
sliderConfidenceInterval,
javax.swing.GroupLayout.PREFERRED_SIZE,
javax.swing.GroupLayout.DEFAULT_SIZE,
javax.swing.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(lblNotComplete)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(resultsTabbedPane,
javax.swing.GroupLayout.DEFAULT_SIZE,
496, Short.MAX_VALUE)
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.BASELINE)
.addComponent(
lblSelectedModelLabel)
.addComponent(lblSelectedModel)
.addComponent(btnExport))
.addGroup(
layout.createParallelGroup(
javax.swing.GroupLayout.Alignment.LEADING)
.addGroup(
layout.createSequentialGroup()
.addGap(11, 11,
11)
.addComponent(
lblComandLineLabel))
.addGroup(
layout.createSequentialGroup()
.addPreferredGap(
javax.swing.LayoutStyle.ComponentPlacement.RELATED)
.addComponent(
jScrollPane1,
javax.swing.GroupLayout.PREFERRED_SIZE,
42,
javax.swing.GroupLayout.PREFERRED_SIZE)))
.addContainerGap()));
pack();
}// </editor-fold>//GEN-END:initComponents
private void sliderConfidenceIntervalStateChanged(
javax.swing.event.ChangeEvent evt) {// GEN-FIRST:event_sliderConfidenceIntervalStateChanged
double confidenceInterval = Double.parseDouble(sliderConfidenceInterval
.getValue() + "") / 100;
lblConfidence.setText(String.valueOf(confidenceInterval));
}// GEN-LAST:event_sliderConfidenceIntervalStateChanged
private void sliderConfidenceIntervalMouseReleased(
java.awt.event.MouseEvent evt) {// GEN-FIRST:event_sliderConfidenceIntervalMouseReleased
double confidenceInterval = Double.parseDouble(sliderConfidenceInterval
.getValue() + "") / 100;
loadCache(confidenceInterval);
fillInResults();
}// GEN-LAST:event_sliderConfidenceIntervalMouseReleased
// Variables declaration - do not modify//GEN-BEGIN:variables
private javax.swing.JPanel aicDataPanel;
private javax.swing.JPanel aicPanel;
private javax.swing.JScrollPane aicScrollPanel;
private javax.swing.JTable aicTable;
private javax.swing.JPanel aiccDataPanel;
private javax.swing.JPanel aiccPanel;
private javax.swing.JScrollPane aiccScrollPanel;
private javax.swing.JTable aiccTable;
private javax.swing.JPanel bicDataPanel;
private javax.swing.JPanel bicPanel;
private javax.swing.JScrollPane bicScrollPanel;
private javax.swing.JTable bicTable;
private javax.swing.JButton btnExport;
private javax.swing.JLabel displayAICImpAlpha;
private javax.swing.JLabel displayAICImpAlphaInv;
private javax.swing.JLabel displayAICImpF;
private javax.swing.JLabel displayAICImpInv;
private javax.swing.JLabel displayAICcImpAlpha;
private javax.swing.JLabel displayAICcImpAlphaInv;
private javax.swing.JLabel displayAICcImpF;
private javax.swing.JLabel displayAICcImpInv;
private javax.swing.JLabel displayAICcoAlpha;
private javax.swing.JLabel displayAICcoAlphaInv;
private javax.swing.JLabel displayAICcoInv;
private javax.swing.JLabel displayAICcoInvAlpha;
private javax.swing.JLabel displayAICoAlpha;
private javax.swing.JLabel displayAICoAlphaInv;
private javax.swing.JLabel displayAICoInv;
private javax.swing.JLabel displayAICoInvAlpha;
private javax.swing.JLabel displayBICImpAlpha;
private javax.swing.JLabel displayBICImpAlphaInv;
private javax.swing.JLabel displayBICImpF;
private javax.swing.JLabel displayBICImpInv;
private javax.swing.JLabel displayBICoAlpha;
private javax.swing.JLabel displayBICoAlphaInv;
private javax.swing.JLabel displayBICoInv;
private javax.swing.JLabel displayBICoInvAlpha;
private javax.swing.JLabel displayDTImpAlpha;
private javax.swing.JLabel displayDTImpAlphaInv;
private javax.swing.JLabel displayDTImpF;
private javax.swing.JLabel displayDTImpInv;
private javax.swing.JLabel displayDToAlpha;
private javax.swing.JLabel displayDToAlphaInv;
private javax.swing.JLabel displayDToInv;
private javax.swing.JLabel displayDToInvAlpha;
private javax.swing.JPanel dtDataPanel;
private javax.swing.JPanel dtPanel;
private javax.swing.JScrollPane dtScrollPanel;
private javax.swing.JTable dtTable;
private javax.swing.JScrollPane jScrollPane1;
private javax.swing.JLabel lblAICImpAlpha;
private javax.swing.JLabel lblAICImpAlphaInv;
private javax.swing.JLabel lblAICImpF;
private javax.swing.JLabel lblAICImpInv;
private javax.swing.JLabel lblAICOverall;
private javax.swing.JLabel lblAICOverallAlpha;
private javax.swing.JLabel lblAICOverallAlphaInv;
private javax.swing.JLabel lblAICOverallInv;
private javax.swing.JLabel lblAICOverallInvAlpha;
private javax.swing.JLabel lblAICPI;
private javax.swing.JLabel lblAICcImpAlpha;
private javax.swing.JLabel lblAICcImpAlphaInv;
private javax.swing.JLabel lblAICcImpF;
private javax.swing.JLabel lblAICcImpInv;
private javax.swing.JLabel lblAICcOverall;
private javax.swing.JLabel lblAICcOverallAlpha;
private javax.swing.JLabel lblAICcOverallAlphaInv;
private javax.swing.JLabel lblAICcOverallInv;
private javax.swing.JLabel lblAICcOverallInvAlpha;
private javax.swing.JLabel lblAICcPI;
private javax.swing.JLabel lblBICImpAlpha;
private javax.swing.JLabel lblBICImpAlphaInv;
private javax.swing.JLabel lblBICImpF;
private javax.swing.JLabel lblBICImpInv;
private javax.swing.JLabel lblBICOverall;
private javax.swing.JLabel lblBICOverallAlpha;
private javax.swing.JLabel lblBICOverallAlphaInv;
private javax.swing.JLabel lblBICOverallInv;
private javax.swing.JLabel lblBICOverallInvAlpha;
private javax.swing.JLabel lblBICPI;
private javax.swing.JLabel lblComandLineLabel;
private javax.swing.JTextArea lblCommandLine;
private javax.swing.JLabel lblConfInt;
private javax.swing.JLabel lblConfidence;
private javax.swing.JLabel lblDTImpAlpha;
private javax.swing.JLabel lblDTImpAlphaInv;
private javax.swing.JLabel lblDTImpF;
private javax.swing.JLabel lblDTImpInv;
private javax.swing.JLabel lblDTOverall;
private javax.swing.JLabel lblDTOverallAlpha;
private javax.swing.JLabel lblDTOverallAlphaInv;
private javax.swing.JLabel lblDTOverallInv;
private javax.swing.JLabel lblDTOverallInvAlpha;
private javax.swing.JLabel lblDTPI;
private javax.swing.JLabel lblNotComplete;
private javax.swing.JLabel lblSelectedModel;
private javax.swing.JLabel lblSelectedModelLabel;
private javax.swing.JTabbedPane resultsTabbedPane;
private javax.swing.JSlider sliderConfidenceInterval;
// End of variables declaration//GEN-END:variables
private void fillInResults() {
Collection<SelectionModel> aicIt = aicResults.getConfidenceModels();
Collection<SelectionModel> bicIt = bicResults.getConfidenceModels();
Collection<SelectionModel> aiccIt = aiccResults.getConfidenceModels();
Collection<SelectionModel> dtIt = dtResults.getConfidenceModels();
aicTableModel.setRowCount(aicIt.size());
fillTable(aicIt, aicTable);
displayAICoAlpha.setText(getDisplayValue(aicResults.getOverallAlpha(),
PARAMETER_G, aicResults.existGammaModels()));
displayAICoAlphaInv.setText(getDisplayValue(
aicResults.getOverallAlphaInv(), PARAMETER_IG,
aicResults.existGammaInvModels()));
displayAICoInvAlpha.setText(getDisplayValue(
aicResults.getOverallInvAlpha(), PARAMETER_IG,
aicResults.existGammaInvModels()));
displayAICoInv.setText(getDisplayValue(aicResults.getOverallInv(),
PARAMETER_I, aicResults.existInvModels()));
displayAICImpAlpha.setText(getDisplayValue(
aicResults.getAlphaImportance(), PARAMETER_G,
aicResults.existGammaModels()));
displayAICImpInv.setText(getDisplayValue(aicResults.getInvImportance(),
PARAMETER_I, aicResults.existInvModels()));
displayAICImpAlphaInv.setText(getDisplayValue(
aicResults.getAlphaInvImportance(), PARAMETER_IG,
aicResults.existGammaInvModels()));
displayAICImpF.setText(getDisplayValue(aicResults.getFImportance(),
PARAMETER_F, aicResults.existFModels()));
bicTableModel.setRowCount(bicIt.size());
fillTable(bicIt, bicTable);
displayBICoAlpha.setText(getDisplayValue(bicResults.getOverallAlpha(),
PARAMETER_G, bicResults.existGammaModels()));
displayBICoAlphaInv.setText(getDisplayValue(
bicResults.getOverallAlphaInv(), PARAMETER_IG,
bicResults.existGammaInvModels()));
displayBICoInvAlpha.setText(getDisplayValue(
bicResults.getOverallInvAlpha(), PARAMETER_IG,
bicResults.existGammaInvModels()));
displayBICoInv.setText(getDisplayValue(bicResults.getOverallInv(),
PARAMETER_I, bicResults.existInvModels()));
displayBICImpAlpha.setText(getDisplayValue(
bicResults.getAlphaImportance(), PARAMETER_G,
bicResults.existGammaModels()));
displayBICImpInv.setText(getDisplayValue(bicResults.getInvImportance(),
PARAMETER_I, bicResults.existInvModels()));
displayBICImpAlphaInv.setText(getDisplayValue(
bicResults.getAlphaInvImportance(), PARAMETER_IG,
bicResults.existGammaInvModels()));
displayBICImpF.setText(getDisplayValue(bicResults.getFImportance(),
PARAMETER_F, bicResults.existFModels()));
aiccTableModel.setRowCount(aiccIt.size());
fillTable(aiccIt, aiccTable);
displayAICcoAlpha.setText(getDisplayValue(
aiccResults.getOverallAlpha(), PARAMETER_G,
aiccResults.existGammaModels()));
displayAICcoAlphaInv.setText(getDisplayValue(
aiccResults.getOverallAlphaInv(), PARAMETER_IG,
aiccResults.existGammaInvModels()));
displayAICcoInvAlpha.setText(getDisplayValue(
aiccResults.getOverallInvAlpha(), PARAMETER_IG,
aiccResults.existGammaInvModels()));
displayAICcoInv.setText(getDisplayValue(aiccResults.getOverallInv(),
PARAMETER_I, aiccResults.existInvModels()));
displayAICcImpAlpha.setText(getDisplayValue(
aiccResults.getAlphaImportance(), PARAMETER_G,
aiccResults.existGammaModels()));
displayAICcImpInv.setText(getDisplayValue(
aiccResults.getInvImportance(), PARAMETER_I,
aiccResults.existInvModels()));
displayAICcImpAlphaInv.setText(getDisplayValue(
aiccResults.getAlphaInvImportance(), PARAMETER_IG,
aiccResults.existGammaInvModels()));
displayAICcImpF.setText(getDisplayValue(aiccResults.getFImportance(),
PARAMETER_F, aiccResults.existFModels()));
dtTableModel.setRowCount(dtIt.size());
fillTable(dtIt, dtTable);
displayDToAlpha.setText(getDisplayValue(dtResults.getOverallAlpha(),
PARAMETER_G, dtResults.existGammaModels()));
displayDToAlphaInv.setText(getDisplayValue(
dtResults.getOverallAlphaInv(), PARAMETER_IG,
dtResults.existGammaInvModels()));
displayDToInvAlpha.setText(getDisplayValue(
dtResults.getOverallInvAlpha(), PARAMETER_IG,
dtResults.existGammaInvModels()));
displayDToInv.setText(getDisplayValue(dtResults.getOverallInv(),
PARAMETER_I, dtResults.existInvModels()));
displayDTImpAlpha.setText(getDisplayValue(
dtResults.getAlphaImportance(), PARAMETER_G,
dtResults.existGammaModels()));
displayDTImpInv.setText(getDisplayValue(dtResults.getInvImportance(),
PARAMETER_I, dtResults.existInvModels()));
displayDTImpAlphaInv.setText(getDisplayValue(
dtResults.getAlphaInvImportance(), PARAMETER_IG,
dtResults.existGammaInvModels()));
displayDTImpF.setText(getDisplayValue(dtResults.getFImportance(),
PARAMETER_F, dtResults.existFModels()));
}
private void fillTable(Collection<SelectionModel> iterator, JTable table) {
int row = 0;
for (SelectionModel model : iterator) {
table.setValueAt(model.getModel().getModelName(), row, 0);
table.setValueAt(model.getModel().getLk(), row, 1);
try {
table.setValueAt(
new Double(ProtTestFormattedOutput.getDecimalString(
model.getValue(), CRITERION_PRECISSION)), row,
2);
table.setValueAt(
new Double(ProtTestFormattedOutput.getDecimalString(
model.getDeltaValue(), CRITERION_PRECISSION)),
row, 3);
table.setValueAt(
new Double(ProtTestFormattedOutput.getDecimalString(
model.getWeightValue(), CRITERION_PRECISSION)),
row, 4);
} catch (NumberFormatException e) {
table.setValueAt(Double.NaN, row, 2);
table.setValueAt(Double.NaN, row, 3);
table.setValueAt(Double.NaN, row, 4);
}
row++;
}
}
private void showCommandLine(String modelName) {
for (Model model : models) {
if (model.getModelName().equals(modelName)) {
lblSelectedModel.setText(modelName);
StringBuilder command = new StringBuilder();
for (int i = 1; i < model.getCommandLine().length; i++) {
command.append(model.getCommandLine()[i]).append(" ");
}
lblCommandLine.setText(command.toString());
break;
}
}
}
class SelectionListener implements ListSelectionListener {
JTable table;
// It is necessary to keep the table since it is not possible
// to determine the table from the event's source
SelectionListener(JTable table) {
this.table = table;
}
public void valueChanged(ListSelectionEvent e) {
// If cell selection is enabled, both row and column change events
// are fired
int first = 0, last = 0;
if (e.getSource() == table.getSelectionModel()
&& table.getRowSelectionAllowed()) {
// Column selection changed
first = e.getFirstIndex();
last = e.getLastIndex();
} else if (e.getSource() == table.getColumnModel()
.getSelectionModel() && table.getColumnSelectionAllowed()) {
// Row selection changed
first = e.getFirstIndex();
last = e.getLastIndex();
}
if (e.getValueIsAdjusting()) {
// The mouse button has not yet been released
} else {
try {
showCommandLine(table.getValueAt(table.getSelectedRow(), 0)
.toString());
} catch (IndexOutOfBoundsException ex) {
// Clear
lblCommandLine.setText("");
lblSelectedModel.setText("");
}
}
}
}
// private String getDisplayValue(double value, String parameter) {
// String toDisplay;
// boolean existModels = false;
// if (parameter.equals(PARAMETER_I)) {
// existModels = existInvModels;
// } else if (parameter.equals(PARAMETER_G)) {
// existModels = existGammaModels;
// } else if (parameter.equals(PARAMETER_IG)) {
// existModels = existGammaInvModels;
// } else if (parameter.equals(PARAMETER_F)) {
// existModels = existFModels;
// }
//
// if (existModels) {
// toDisplay = ProtTestFormattedOutput.getDecimalString(value,
// IMPORTANCE_PRECISSION);
// } else {
// toDisplay = "No " + parameter + " models";
// }
// return toDisplay;
// }
@Action
public void exportData() {
InformationCriterion ic = null;
switch (resultsTabbedPane.getSelectedIndex()) {
case AIC_TAB:
ic = aicResults.getInformationCriterion();
break;
case BIC_TAB:
ic = bicResults.getInformationCriterion();
break;
case AICC_TAB:
ic = aiccResults.getInformationCriterion();
break;
case DT_TAB:
ic = dtResults.getInformationCriterion();
break;
}
if (ic != null) {
mainFrame.enableHandler();
ProtTestPrinter
.printSelectionHeader(CRITERION_NAMES[resultsTabbedPane
.getSelectedIndex()]);
mainFrame.getFacade().printModelsSorted(ic);
mainFrame.disableHandler();
}
}
}