TestEutilInterface.java

/*******************************************************************************
 * Copyright 2014 Virginia Polytechnic Institute and State University
 * 
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 * 
 *   http://www.apache.org/licenses/LICENSE-2.0
 * 
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 ******************************************************************************/
package edu.vt.vbi.patric.test;

import org.json.simple.JSONObject;

import edu.vt.vbi.patric.common.EutilInterface;
import junit.framework.TestCase;

public class TestEutilInterface extends TestCase {

	private boolean testmode = false;

	public void testGetResult() {
		if (testmode == true) {
			EutilInterface eui = new EutilInterface();
			JSONObject result = null;
			try {
				result = eui.getResults("pubmed", "(mycobacterium+tuberculosis)+AND+(dnaN)", "&sort=pub+date", "&sort=pub+date&retmode=xml", 1, 5);
				// result = eui.getResults("gds", "txid138[Organism:exp]+AND+gsm[ETYP]", "", "", 1, 20);
				// result = eui.getResults("gds", "txid2093[Organism:exp]+AND+gse[ETYP]", "", "", 1, 20);
				// result = eui.getResults("pepdome", "txid1763[Organism:exp]+AND+PSM[ETYP]", "", "", 1, 20);
				// result = eui.getResults("structure", "txid262[Organism:exp]", "", "", 1, 20);
			}
			catch (Exception ex) {
				// ex.printStackTrace();
			}
			System.out.println(result.toString());
		}
	}

	public static void main(String[] args) {
		junit.textui.TestRunner.run(TestEutilInterface.class);

	}
}