TestIT.java

/*
 * This file is part of CoAnSys project.
 * Copyright (c) 2012-2015 ICM-UW
 * 
 * CoAnSys is free software: you can redistribute it and/or modify
 * it under the terms of the GNU Affero General Public License as published by
 * the Free Software Foundation, either version 3 of the License, or
 * (at your option) any later version.

 * CoAnSys is distributed in the hope that it will be useful,
 * but WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
 * GNU Affero General Public License for more details.
 * 
 * You should have received a copy of the GNU Affero General Public License
 * along with CoAnSys. If not, see <http://www.gnu.org/licenses/>.
 */

package pl.edu.icm.coansys.kwdextraction;

public class TestIT {
/*
    @Test
    public void testTest1() throws Exception {
        System.out.println("Test1");
        OozieRunner or = new OozieRunner();
        File workflowOutputData = or.run();

        assertTrue(workflowOutputData.exists());
        assertTrue(workflowOutputData.isDirectory());
        assertTrue(workflowOutputData.listFiles().length > 0);

        List<String> expected = Arrays.asList(
            "inducing cellular organic functional disturbances",
            "normal red blood cell formation",
            "inadequate bone marrow responses compared",
            "erythroid colony forming units",
            "decreased total iron binding capacity",
            "diseases including inflammatory disorders",
            "senescent red blood cells",
            "iron deficiency body iron homeostasis");
        List<String> actual = null;

        int records = 0;
        for (File f : FileUtils.listFiles(workflowOutputData, null, true)) {
            if (f.isFile() && f.getName().startsWith("part-")) {
                Configuration conf = new Configuration();
                Path path = new Path("file://" + f.getAbsolutePath());
                SequenceFile.Reader reader = new SequenceFile.Reader(conf, SequenceFile.Reader.file(path));
                Text key = new Text();
                BytesWritable value = new BytesWritable();
                while (reader.next(key, value)) {
                    DocumentProtos.KeywordsList extractedKwds = DocumentProtos.KeywordsList.parseFrom(value.copyBytes());
                    actual = extractedKwds.getKeywordsList();
                    records ++;
                }
            }
        }
        assertEquals(records, 1);
        assertEquals(actual, expected);
    }
    */
}