package org.bridgedb.gui;
import java.io.File;
import javax.swing.JFileChooser;
public class FileParameterModel extends SimpleParameterModel implements BridgeDbParameterModel
{
public FileParameterModel()
{
super (new Object[][] {
new Object[]
{
"Tab delimited text file",
new File(System.getProperty("user.home")),
new FileParameter ("Tab-delimited text files", "*.txt|*.tsv", false, JFileChooser.FILES_ONLY)
}
});
}
@Override
public String getConnectionString()
{
return "idmapper-text:" + getFile(0).toURI();
}
@Override
public String getName()
{
return "Local text file";
}
public String toString() { return getName(); }
@Override
public String getHelpHtml()
{
return
"<html><h1>Local text file" +
"<p>Read mappings from a text file." +
"<p>The file should be formatted as a tab-delimited text file, with " +
"two or more columns, and a header row. Each column should contain " +
"identifiers from exactly one source. The system will work best if the " +
"header row uses the correct data source name." +
"<p>All identifiers on the same row are assumed to be related " +
"to each other. So a row with three columns will establish a relation " +
"between the identifiers in column 1 and 2, column 1 and 3, and column 2 and 3.";
}
@Override
public Category getCategory()
{
return Category.CUSTOM;
}
private boolean enabled = false;
@Override
public void loadClass() throws ClassNotFoundException
{
Class.forName("org.bridgedb.file.IDMapperText");
enabled = true;
}
@Override
public boolean isEnabled()
{
return enabled;
}
}