package org.cytoscape.rest.internal.reader; import java.io.InputStream; import org.cytoscape.io.CyFileFilter; import org.cytoscape.io.read.AbstractInputStreamTaskFactory; import org.cytoscape.model.CyNetworkFactory; import org.cytoscape.model.CyNetworkManager; import org.cytoscape.model.subnetwork.CyRootNetworkManager; import org.cytoscape.view.model.CyNetworkViewFactory; import org.cytoscape.work.TaskIterator; /** * Factory for Edge List reader objects. * */ public class EdgeListReaderFactory extends AbstractInputStreamTaskFactory { private final CyNetworkViewFactory cyNetworkViewFactory; private final CyNetworkFactory cyNetworkFactory; private final CyNetworkManager cyNetworkManager;; private final CyRootNetworkManager cyRootNetworkManager; public EdgeListReaderFactory(CyFileFilter filter, CyNetworkViewFactory cyNetworkViewFactory, CyNetworkFactory cyNetworkFactory, final CyNetworkManager cyNetworkManager, CyRootNetworkManager cyRootNetworkManager) { super(filter); this.cyNetworkManager = cyNetworkManager; this.cyRootNetworkManager = cyRootNetworkManager; this.cyNetworkFactory = cyNetworkFactory; this.cyNetworkViewFactory = cyNetworkViewFactory; } @Override public TaskIterator createTaskIterator(InputStream inputStream, String collectionName) { return new TaskIterator(new EdgeListReader(inputStream, cyNetworkViewFactory, cyNetworkFactory, this.cyNetworkManager, this.cyRootNetworkManager, collectionName)); } }