/**
*
*/
package plugins.kernel.roi.descriptor.property;
import icy.plugin.abstract_.Plugin;
import icy.plugin.interface_.PluginROIDescriptor;
import icy.roi.ROI;
import icy.roi.ROIDescriptor;
import icy.sequence.Sequence;
import icy.type.point.Point5D;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
/**
* This {@link PluginROIDescriptor} implements the position ROI descriptors:<br/>
* <li>Position X (in pixel)</li><br/>
* <li>Position Y (in pixel)</li><br/>
* <li>Position C (in pixel)</li><br/>
* <li>Position Z (in pixel)</li><br/>
* <li>Position T (in pixel)</li>
*
* @author Stephane
*/
public class ROIPositionDescriptorsPlugin extends Plugin implements PluginROIDescriptor
{
public static final String ID_POSITION_X = ROIPositionXDescriptor.ID;
public static final String ID_POSITION_Y = ROIPositionYDescriptor.ID;
public static final String ID_POSITION_Z = ROIPositionZDescriptor.ID;
public static final String ID_POSITION_T = ROIPositionTDescriptor.ID;
public static final String ID_POSITION_C = ROIPositionCDescriptor.ID;
public static final ROIPositionXDescriptor positionXDescriptor = new ROIPositionXDescriptor();
public static final ROIPositionYDescriptor positionYDescriptor = new ROIPositionYDescriptor();
public static final ROIPositionZDescriptor positionZDescriptor = new ROIPositionZDescriptor();
public static final ROIPositionTDescriptor positionTDescriptor = new ROIPositionTDescriptor();
public static final ROIPositionCDescriptor positionCDescriptor = new ROIPositionCDescriptor();
@Override
public List<ROIDescriptor> getDescriptors()
{
final List<ROIDescriptor> result = new ArrayList<ROIDescriptor>();
result.add(positionXDescriptor);
result.add(positionYDescriptor);
result.add(positionZDescriptor);
result.add(positionTDescriptor);
result.add(positionCDescriptor);
return result;
}
@Override
public Map<ROIDescriptor, Object> compute(ROI roi, Sequence sequence) throws UnsupportedOperationException
{
final Map<ROIDescriptor, Object> result = new HashMap<ROIDescriptor, Object>();
try
{
// compute position descriptors
final Point5D position = roi.getPosition5D();
result.put(positionXDescriptor, Double.valueOf(ROIPositionXDescriptor.getPositionX(position)));
result.put(positionYDescriptor, Double.valueOf(ROIPositionYDescriptor.getPositionY(position)));
result.put(positionZDescriptor, Double.valueOf(ROIPositionZDescriptor.getPositionZ(position)));
result.put(positionTDescriptor, Double.valueOf(ROIPositionTDescriptor.getPositionT(position)));
result.put(positionCDescriptor, Double.valueOf(ROIPositionCDescriptor.getPositionC(position)));
}
catch (Exception e)
{
final String mess = getClass().getSimpleName() + ": cannot compute descriptors for '" + roi.getName() + "'";
throw new UnsupportedOperationException(mess, e);
}
return result;
}
}