/*
* RapidMiner
*
* Copyright (C) 2001-2011 by Rapid-I and the contributors
*
* Complete list of developers available at our web site:
*
* http://rapid-i.com
*
* This program is free software: you can redistribute it and/or modify
* it under the terms of the GNU Affero General Public License as published by
* the Free Software Foundation, either version 3 of the License, or
* (at your option) any later version.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
* GNU Affero General Public License for more details.
*
* You should have received a copy of the GNU Affero General Public License
* along with this program. If not, see http://www.gnu.org/licenses/.
*/
package com.rapidminer.operator.visualization.dependencies;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.Set;
import java.util.TreeSet;
import java.util.Map.Entry;
import com.rapidminer.example.Attribute;
import com.rapidminer.example.Example;
import com.rapidminer.example.ExampleSet;
import com.rapidminer.operator.Operator;
import com.rapidminer.operator.OperatorDescription;
import com.rapidminer.operator.OperatorException;
import com.rapidminer.operator.UserError;
import com.rapidminer.operator.ports.InputPort;
import com.rapidminer.operator.ports.OutputPort;
import com.rapidminer.operator.ports.metadata.AttributeSetPrecondition;
import com.rapidminer.parameter.ParameterType;
import com.rapidminer.parameter.ParameterTypeAttribute;
import com.rapidminer.tools.Ontology;
import com.rapidminer.tools.container.Tupel;
/**
* This operator calculates the transition matrix of a specified attribute,
* i.e. the operator counts how often each possible nominal value follows after
* each other.
*
* @author Sebastian Land
*/
public class TransitionMatrixOperator extends Operator {
public static final String PARAMETER_ATTRIBUTE = "attribute";
private InputPort exampleSetInput = getInputPorts().createPort("example set");
private OutputPort exampleSetOutput = getOutputPorts().createPort("example set");
private OutputPort matrixOutput = getOutputPorts().createPort("transition matrix");
public TransitionMatrixOperator(OperatorDescription description) {
super(description);
exampleSetInput.addPrecondition(new AttributeSetPrecondition(exampleSetInput, AttributeSetPrecondition.getAttributesByParameter(this, PARAMETER_ATTRIBUTE), Ontology.NOMINAL));
getTransformer().addPassThroughRule(exampleSetInput, exampleSetOutput);
getTransformer().addGenerationRule(matrixOutput, NumericalMatrix.class);
}
@Override
public void doWork() throws OperatorException {
ExampleSet exampleSet = exampleSetInput.getData();
Attribute attribute = exampleSet.getAttributes().get(getParameterAsString(PARAMETER_ATTRIBUTE));
if (attribute == null)
throw new UserError(this, 111, getParameterAsString(PARAMETER_ATTRIBUTE));
if (!attribute.isNominal())
throw new UserError(this, 119, attribute.getName(), "TransitionMatrix");
Set<String> values = new TreeSet<String>();
Map<Tupel<String, String>, Integer> transitions = new HashMap<Tupel<String, String>, Integer>();
int numberOfTransitions = exampleSet.size() - 1;
String lastValue = null;
for (Example example: exampleSet) {
String currentValue = example.getNominalValue(attribute);
values.add(currentValue);
if (lastValue != null) {
Tupel<String, String> currentTupel = new Tupel<String, String>(lastValue, currentValue);
if (transitions.containsKey(currentTupel))
transitions.put(currentTupel, transitions.get(currentTupel) + 1);
else
transitions.put(currentTupel, 1);
}
lastValue = currentValue;
}
String[] valueArray = values.toArray(new String[] {});
// creating map for translation of string into matrix position
Map<String, Integer> valuePositions = new HashMap<String, Integer>();
int i = 0;
for (String value: valueArray) {
valuePositions.put(value, i);
i++;
}
NumericalMatrix matrix = new NumericalMatrix("Transition", valueArray, false);
for(Entry<Tupel<String, String>, Integer> entry: transitions.entrySet()) {
matrix.setValue(valuePositions.get(entry.getKey().getFirst()), valuePositions.get(entry.getKey().getSecond()), ((double) entry.getValue().intValue()) / numberOfTransitions);
}
exampleSetOutput.deliver(exampleSet);
matrixOutput.deliver(matrix);
}
@Override
public List<ParameterType> getParameterTypes() {
List<ParameterType> types = super.getParameterTypes();
types.add(new ParameterTypeAttribute(PARAMETER_ATTRIBUTE, "Specifies the nominal attribute.", exampleSetInput, false, false, Ontology.NOMINAL));
return types;
}
}