AbstractSequenceReader.java

/*
 * Copyright 2015 MiLaboratory.com
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
package com.milaboratory.core.io.sequence;

import java.util.concurrent.atomic.AtomicLong;

public abstract class AbstractSequenceReader<R extends SequenceRead> implements SequenceReader<R> {
    protected final AtomicLong readsCounter = new AtomicLong();

    @Override
    public final long getNumberOfReads() {
        return readsCounter.get();
    }

    protected final void addOneRead() {
        readsCounter.incrementAndGet();
    }
}