/*
* EuroCarbDB, a framework for carbohydrate bioinformatics
*
* Copyright (c) 2006-2009, Eurocarb project, or third-party contributors as
* indicated by the @author tags or express copyright attribution
* statements applied by the authors.
*
* This copyrighted material is made available to anyone wishing to use, modify,
* copy, or redistribute it subject to the terms and conditions of the GNU
* Lesser General Public License, as published by the Free Software Foundation.
* A copy of this license accompanies this distribution in the file LICENSE.txt.
*
* This program is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY
* or FITNESS FOR A PARTICULAR PURPOSE. See the GNU Lesser General Public License
* for more details.
*
* Last commit: $Rev: 1210 $ by $Author: glycoslave $ on $Date:: 2009-06-12 #$
*/
/*
* PeakPickerOptionsDialog.java
*
* Created on 15 October 2008, 16:48
*/
/**
*
* @author aceroni
*/
public class PeakPickerOptionsDialog extends javax.swing.JDialog {
/** Creates new form PeakPickerOptionsDialog */
public PeakPickerOptionsDialog(java.awt.Frame parent, boolean modal) {
super(parent, modal);
initComponents();
}
/** This method is called from within the constructor to
* initialize the form.
* WARNING: Do NOT modify this code. The content of this method is
* always regenerated by the Form Editor.
*/
// <editor-fold defaultstate="collapsed" desc="Generated Code">//GEN-BEGIN:initComponents
private void initComponents() {
jLabel1 = new javax.swing.JLabel();
field_peak_bound = new javax.swing.JTextField();
jLabel2 = new javax.swing.JLabel();
field_peak_bound_ms2 = new javax.swing.JTextField();
jLabel3 = new javax.swing.JLabel();
field_fwhm_bound = new javax.swing.JTextField();
jLabel4 = new javax.swing.JLabel();
field_correlation = new javax.swing.JTextField();
jLabel5 = new javax.swing.JLabel();
field_noise_level = new javax.swing.JTextField();
jLabel6 = new javax.swing.JLabel();
field_search_radius = new javax.swing.JTextField();
jLabel7 = new javax.swing.JLabel();
field_signal_to_noise = new javax.swing.JTextField();
jLabel8 = new javax.swing.JLabel();
field_win_len = new javax.swing.JTextField();
jLabel9 = new javax.swing.JLabel();
field_scale = new javax.swing.JTextField();
jLabel10 = new javax.swing.JLabel();
field_spacing = new javax.swing.JTextField();
jSeparator1 = new javax.swing.JSeparator();
button_ok = new javax.swing.JButton();
button_cancel = new javax.swing.JButton();
jLabel11 = new javax.swing.JLabel();
field_end_mz = new javax.swing.JTextField();
jLabel12 = new javax.swing.JLabel();
field_start_mz = new javax.swing.JTextField();
jSeparator2 = new javax.swing.JSeparator();
setDefaultCloseOperation(javax.swing.WindowConstants.DISPOSE_ON_CLOSE);
jLabel1.setText("Min MS peak intensity");
field_peak_bound.setText("jTextField1");
jLabel2.setText("Min MS/MS peak intensity");
field_peak_bound_ms2.setText("jTextField1");
jLabel3.setText("Min peak width");
field_fwhm_bound.setText("jTextField1");
jLabel4.setText("Min correlation");
field_correlation.setText("jTextField1");
jLabel5.setText("Noise level");
field_noise_level.setText("jTextField1");
jLabel6.setText("Search radius");
field_search_radius.setText("jTextField1");
jLabel7.setText("Min signal/noise ratio");
field_signal_to_noise.setText("jTextField1");
jLabel8.setText("Window size for s/n estimation");
field_win_len.setText("jTextField1");
jLabel9.setText("Wavelet width");
field_scale.setText("jTextField1");
jLabel10.setText("Wavelet spacing");
field_spacing.setText("jTextField1");
button_ok.setText("OK");
button_cancel.setText("Cancel");
jLabel11.setText("End m/z");
field_end_mz.setText("jTextField1");
jLabel12.setText("Start m/z");
field_start_mz.setText("jTextField1");
org.jdesktop.layout.GroupLayout layout = new org.jdesktop.layout.GroupLayout(getContentPane());
getContentPane().setLayout(layout);
layout.setHorizontalGroup(
layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING)
.add(layout.createSequentialGroup()
.addContainerGap()
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING)
.add(layout.createSequentialGroup()
.add(jLabel12)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(field_start_mz, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, 85, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(jLabel11)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(field_end_mz, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 91, Short.MAX_VALUE))
.add(jSeparator2, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 324, Short.MAX_VALUE)
.add(jSeparator1, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 324, Short.MAX_VALUE)
.add(layout.createSequentialGroup()
.add(96, 96, 96)
.add(button_ok)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(button_cancel))
.add(layout.createSequentialGroup()
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING)
.add(jLabel7)
.add(jLabel8)
.add(jLabel2)
.add(jLabel1)
.add(jLabel3)
.add(jLabel4)
.add(jLabel5)
.add(jLabel6)
.add(jLabel9)
.add(jLabel10))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING)
.add(field_signal_to_noise, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_win_len, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_peak_bound, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_peak_bound_ms2, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_fwhm_bound, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_correlation, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_noise_level, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_search_radius, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_scale, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE)
.add(field_spacing, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, 118, Short.MAX_VALUE))))
.addContainerGap())
);
layout.linkSize(new java.awt.Component[] {button_cancel, button_ok}, org.jdesktop.layout.GroupLayout.HORIZONTAL);
layout.setVerticalGroup(
layout.createParallelGroup(org.jdesktop.layout.GroupLayout.LEADING)
.add(layout.createSequentialGroup()
.addContainerGap()
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel12)
.add(field_start_mz, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE)
.add(jLabel11)
.add(field_end_mz, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.UNRELATED)
.add(jSeparator2, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, 10, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel7)
.add(field_signal_to_noise, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(field_win_len, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE)
.add(jLabel8))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel1)
.add(field_peak_bound, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel2)
.add(field_peak_bound_ms2, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel3)
.add(field_fwhm_bound, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel4)
.add(field_correlation, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel5)
.add(field_noise_level, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel6)
.add(field_search_radius, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel9)
.add(field_scale, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(jLabel10)
.add(field_spacing, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE))
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(jSeparator1, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE, 10, org.jdesktop.layout.GroupLayout.PREFERRED_SIZE)
.addPreferredGap(org.jdesktop.layout.LayoutStyle.RELATED)
.add(layout.createParallelGroup(org.jdesktop.layout.GroupLayout.BASELINE)
.add(button_ok)
.add(button_cancel))
.addContainerGap(org.jdesktop.layout.GroupLayout.DEFAULT_SIZE, Short.MAX_VALUE))
);
pack();
}// </editor-fold>//GEN-END:initComponents
/**
* @param args the command line arguments
*/
public static void main(String args[]) {
java.awt.EventQueue.invokeLater(new Runnable() {
public void run() {
PeakPickerOptionsDialog dialog = new PeakPickerOptionsDialog(new javax.swing.JFrame(), true);
dialog.addWindowListener(new java.awt.event.WindowAdapter() {
public void windowClosing(java.awt.event.WindowEvent e) {
System.exit(0);
}
});
dialog.setVisible(true);
}
});
}
// Variables declaration - do not modify//GEN-BEGIN:variables
private javax.swing.JButton button_cancel;
private javax.swing.JButton button_ok;
private javax.swing.JTextField field_correlation;
private javax.swing.JTextField field_end_mz;
private javax.swing.JTextField field_fwhm_bound;
private javax.swing.JTextField field_noise_level;
private javax.swing.JTextField field_peak_bound;
private javax.swing.JTextField field_peak_bound_ms2;
private javax.swing.JTextField field_scale;
private javax.swing.JTextField field_search_radius;
private javax.swing.JTextField field_signal_to_noise;
private javax.swing.JTextField field_spacing;
private javax.swing.JTextField field_start_mz;
private javax.swing.JTextField field_win_len;
private javax.swing.JLabel jLabel1;
private javax.swing.JLabel jLabel10;
private javax.swing.JLabel jLabel11;
private javax.swing.JLabel jLabel12;
private javax.swing.JLabel jLabel2;
private javax.swing.JLabel jLabel3;
private javax.swing.JLabel jLabel4;
private javax.swing.JLabel jLabel5;
private javax.swing.JLabel jLabel6;
private javax.swing.JLabel jLabel7;
private javax.swing.JLabel jLabel8;
private javax.swing.JLabel jLabel9;
private javax.swing.JSeparator jSeparator1;
private javax.swing.JSeparator jSeparator2;
// End of variables declaration//GEN-END:variables
}