/*******************************************************************************
* Open Behavioral Health Information Technology Architecture (OBHITA.org)
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* * Redistributions of source code must retain the above copyright
* notice, this list of conditions and the following disclaimer.
* * Redistributions in binary form must reproduce the above copyright
* notice, this list of conditions and the following disclaimer in the
* documentation and/or other materials provided with the distribution.
* * Neither the name of the <organization> nor the
* names of its contributors may be used to endorse or promote products
* derived from this software without specific prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
* ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
* WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
* DISCLAIMED. IN NO EVENT SHALL <COPYRIGHT HOLDER> BE LIABLE FOR ANY
* DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
* (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
* LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND
* ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
* (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
* SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
******************************************************************************/
package gov.samhsa.acs.documentsegmentation.tools.redact.impl.clinicalfactlevel;
import java.util.List;
import java.util.Set;
import javax.xml.xpath.XPathExpressionException;
import org.w3c.dom.Document;
import org.w3c.dom.Node;
import org.w3c.dom.NodeList;
import gov.samhsa.acs.brms.domain.ClinicalFact;
import gov.samhsa.acs.brms.domain.FactModel;
import gov.samhsa.acs.brms.domain.RuleExecutionContainer;
import gov.samhsa.acs.brms.domain.XacmlResult;
import gov.samhsa.acs.common.tool.DocumentAccessor;
import gov.samhsa.acs.documentsegmentation.tools.redact.base.AbstractClinicalFactLevelRedactionHandler;
/**
* The Class HumanReadableTableRowById.
*/
public class HumanReadableTableRowById extends
AbstractClinicalFactLevelRedactionHandler {
/** The Constant XPATH_HUMAN_READABLE_TABLE_ROW_BY_REFERENCE. */
public static final String XPATH_HUMAN_READABLE_TABLE_ROW_BY_REFERENCE = "/hl7:ClinicalDocument/hl7:component/hl7:structuredBody/hl7:component/hl7:section[child::hl7:entry[child::hl7:generatedEntryId/text()='%1']]/hl7:text/hl7:table/hl7:tbody/hl7:tr[descendant-or-self::node()[@ID='%2']]";
/**
* Instantiates a new document node collector for human readable table row
* by id.
*
* @param documentAccessor
* the document accessor
*/
public HumanReadableTableRowById(
DocumentAccessor documentAccessor) {
super(documentAccessor);
}
/*
* (non-Javadoc)
*
* @see gov.samhsa.acs.documentsegmentation.tools.redact.base.
* AbstractClinicalFactLevelCallback#execute(org.w3c.dom.Document,
* gov.samhsa.acs.brms.domain.XacmlResult,
* gov.samhsa.acs.brms.domain.FactModel, org.w3c.dom.Document,
* gov.samhsa.acs.brms.domain.ClinicalFact,
* gov.samhsa.acs.brms.domain.RuleExecutionContainer, java.util.List,
* java.util.Set, java.util.Set)
*/
@Override
public void execute(Document xmlDocument, XacmlResult xacmlResult,
FactModel factModel, Document factModelDocument, ClinicalFact fact,
RuleExecutionContainer ruleExecutionContainer,
List<Node> listOfNodes,
Set<String> redactSectionCodesAndGeneratedEntryIds,
Set<String> redactSensitiveCategoryCodes)
throws XPathExpressionException {
String foundCategory = findMatchingCategory(xacmlResult, fact);
if (foundCategory != null) {
NodeList references = getEntryReferenceIdNodeList(
factModelDocument, fact);
for (int i = 0; i < references.getLength(); i++) {
// Collect the table rows
addNodesToList(xmlDocument, listOfNodes,
redactSectionCodesAndGeneratedEntryIds,
XPATH_HUMAN_READABLE_TABLE_ROW_BY_REFERENCE,
fact.getEntry(), references.item(i).getNodeValue());
}
redactSensitiveCategoryCodes.add(foundCategory);
}
}
}